Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01204 ATGGCTAATTTATTGAACCATCCAGAAGTTATAAAGAAGGCAAAAAATGAAATAGACACTCATGTAGGATCAGATCGTCTCGTAGAGGAATCTGACATGTCAAAACTTCCTTACATTCAATGCATTGTTTACGAGACACTTCGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGCATTGTAGGAAAATATAATCTCCCGAAAGACACAATTGTGTTGGTGAATGCCTGGGCTGCCCATATGGATCCAAAAGTGTGGAGTGATCCAACACACTTTAAGCCTGAAAGGTTTGAGAACGAAAATGAAGTAAACAGGTTACTTTCATTTGGGTTAGGGCGGAGGGCTTGCCCTGGATCAAACTTGGCTCAACGCACAGTTGGCTTATCCATAGCTTTATTACTTCAACGTTTTGAGTGGAAACGAATTGGTAAGGAAGAAATTGATATGTCTGAAGCAAATGGAATTACTATTTCAAGAAAAAATCCATTGGAAGCTATGTGCCTACTCCGTCAATCACCAACAATTGAGAATATGTCTTGA 558 0.3961 MANLLNHPEVIKKAKNEIDTHVGSDRLVEESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCIVGKYNLPKDTIVLVNAWAAHMDPKVWSDPTHFKPERFENENEVNRLLSFGLGRRACPGSNLAQRTVGLSIALLLQRFEWKRIGKEEIDMSEANGITISRKNPLEAMCLLRQSPTIENMS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01204 185 PRINTS P450 superfamily signature 122 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS P450 superfamily signature 113 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS E-class P450 group I signature 112 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PRINTS E-class P450 group I signature 122 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 Pfam Cytochrome P450 2 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 SUPERFAMILY Cytochrome P450 1 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 115 124 IPR017972 GO:0005506|GO:0016705
Vian9g01204 185 Gene3D Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01204 185 PANTHER CYTOCHROME P450 82C3-RELATED 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01204 Vian-Chr9 25250329 25250886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01204 1 176 Cytochrome P450 AT5G36220 59.659 4.55e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01204 K13260 - vum:124831494 306.99