Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01199 ATGGCAGAGTTGCTGCACAATCCTGAAAAACTATCAAAAACAAAAAGGGAACTTGAAAAAGTTTTTAGTGAAAGTGGGTTTGAACCTGAAGATTCAACTATATCTAAGCTCACTTACCTACAAGCCGTCGTGAAGGAAACGCTTAGATTGCACCCAACAGCCCCAATATTAATTCACAAATCAGTAGCTGAAGTAGATATATGTGGCTTTCAGGTTCCCAAAGATGCACAAGTTCTTGTTAATGTATGGAGCACGGGGCGAGATTCAAGCATTTGGACAGACCCAAATTCATTTGTACCTGAAAGATTTTTAGGGAACGAAGATTTCAAAGGAGAAGATCATGGTTTCATTCCTTTTGGGTCTGGTAGAAGAATGTGCCCTGGTGTTGCACTGGCTAATAGAATTGTTCATACCATGTTGGCTTCACTTCTGTACCATTTTGATTGGAAGCTAGAAGATGGGGAAAAACCACAGGACATGGACATGACTGAAAAATTCAGCATTACTTTACATAAAGTCAAGCCTCTGAAGACAATTCCCATTAGAAAATGA 552 0.3949 MAELLHNPEKLSKTKRELEKVFSESGFEPEDSTISKLTYLQAVVKETLRLHPTAPILIHKSVAEVDICGFQVPKDAQVLVNVWSTGRDSSIWTDPNSFVPERFLGNEDFKGEDHGFIPFGSGRRMCPGVALANRIVHTMLASLLYHFDWKLEDGEKPQDMDMTEKFSITLHKVKPLKTIPIRK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01199 183 PRINTS P450 superfamily signature 117 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS P450 superfamily signature 42 53 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS P450 superfamily signature 126 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 SUPERFAMILY Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 119 128 IPR017972 GO:0005506|GO:0016705
Vian9g01199 183 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 182 - -
Vian9g01199 183 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS E-class P450 group I signature 126 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS E-class P450 group I signature 41 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g01199 183 PRINTS E-class P450 group I signature 116 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01199 Vian-Chr9 25155583 25156134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01199 1 183 Cytochrome P450 AT1G33720 54.054 1.95e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01199 - - pvu:PHAVU_010G012700g 325.479