Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01198 ATGACACCATGTTCTTCAGTGGTAAAAGACTCTCTAAGAAGAAAGTTAATTGTATGGAAAGAGATGTCAAAAAAGAGGAGCAGACATCATAGAAGTTCAACCTGTCCTACTTCTGCAATAAGCATGAACGACAACTTGTTAACAACATTTGTGCAAGATCCTGTCTCTCCTTTGGTCTATCACCTTCATAAACAACATGTGTATGCCACAAAAACGAAGTTAACTAGGTCTGTGTCATTTCCTCTACCTGACCCCTCATCAAAGAGAGAAAGCTTTGGGGCTGCAGGGAACGCTTTTTCACCGGAAGGGAAAGGAAAATTATGTTTTGAAAGCAAAACACCAAAGTCAGGTCAATTTGAATCCTCAAAAAAGTTTTACCTAAGGTCCTTGTCTCAATGTTTCAATGTAAATGAAGCAATGATTACAAGAGATGTTACTAGTTCTTCACCTCAGGATCAAAGTGTCACCGAAATCAAACATTTTAAGAATCTGAAACAGAAAATAAAGCATGTTATAGGAGAAAGTAGAAAAGAAAAGCTTCGAGTAGCTATGGATGCTATTATTGACAAACTTCCTCAAGGCCATGGGATATCGAATGATTTGAAGAAAGAAGTTTTTAAGAAAATGACAGATTCTAATGATGGTAGAGAAGGTGAAAATTGTCATGGAAAATATAATGAGAGTGATCGTGTTACTAGTTCATTTGCCAAGCATCACTGGAACATCATTCGAAGAAAATTGTCTCTTGAAGAACCACTAGACAATTATTTTCGCTCCCATGAGAAGGGCTTTAATTCAGAAAAAATTCGCCTCCAATCCAAGCAGCTAAAATTAAGAACAGAAAAGGGACATTCACCATTGAAGATGCTGGTACAAAGGATGCTTTCATTGCCTGATCTCAATGCCTTGTCCTATCCTTATCAAAATAGCGACTTCCCTGATATTTCATCTGTGACTGAGCCAAAGCCAAAAGTAGCTTCTGGGGATGGAACATTGAGTTCAGAGAACATTTTCAATCAGAAAAAGAGGCCTGGCATTAATTTACATTCAAAAATTCGGCTTCAATCAGAGACACCTGTAGAAGATTTGATTCAGAAACACCCTGACAGTGTGGATGAAAATGATCAAGAGATTAGTAATATTTTTGAACAAGGATCAGAGTGCAGCAGTGAGATTAATGGCAAGGCTGGTGTGGCAACTGATGATTTTGGACATAGTTTTTTTAAAAGTGGTGACACCTCTGATGACCAAGAAATGATTGAGCCGATAAAAGAAAACATGACTGCAATAGAAGAATCAGTGGATTCAAAATTGATTACAGAACCTGGCATTGAGCTAGAAAACATTATTGAGCAACAAGAGGCTACCATGGATTCACTCAAAGTGCAAGACACCATAGAGAATGCTCAAAAAGTGGAGATTCAAAGCAGGAACTTGAACTATGACATTACTTTTTTTCATATCCCCATCAAAGACAAAGCTGAGTTTAACTACGTGAAATTTGTACTTGAGATATCTGGACTGACTGGTAAAGACTGCCTTTCTTCATGGCATTCAAGTGACCACCCAGTTGATCCACTACTCTATGAAGAAATGGAGAATGACCTTGATTTCTGCACTTATGGTGGCAGTGGCCAATGCAATCACCATGTGTTGTTTGACCTAATCAATGAGACATTGTTGGAACTTTCTGGGAGGTGTCACTGCTGCTGTTCCATACCTTTCTCATCTTCTCATCCAATGCCAAAAGGGTGTCACACTCTTCATCAAGTGTGGATTCATATGAACAAGTCCTTGTGCCTCAGATCCAAAACTGGGCTAACCATAGATGACCATGTAAGTCGTGATCTAGAAAGGCGTGATGGGTGGGTGAACCCTAAATTGTATGCACAGTGTGTCAGTTTGGAGCTTGAAGACTTTATTTTGCATGATCTTCTGGAGGAAATATCATGTGACTTAGCATGCATTTAA 1971 0.3876 MTPCSSVVKDSLRRKLIVWKEMSKKRSRHHRSSTCPTSAISMNDNLLTTFVQDPVSPLVYHLHKQHVYATKTKLTRSVSFPLPDPSSKRESFGAAGNAFSPEGKGKLCFESKTPKSGQFESSKKFYLRSLSQCFNVNEAMITRDVTSSSPQDQSVTEIKHFKNLKQKIKHVIGESRKEKLRVAMDAIIDKLPQGHGISNDLKKEVFKKMTDSNDGREGENCHGKYNESDRVTSSFAKHHWNIIRRKLSLEEPLDNYFRSHEKGFNSEKIRLQSKQLKLRTEKGHSPLKMLVQRMLSLPDLNALSYPYQNSDFPDISSVTEPKPKVASGDGTLSSENIFNQKKRPGINLHSKIRLQSETPVEDLIQKHPDSVDENDQEISNIFEQGSECSSEINGKAGVATDDFGHSFFKSGDTSDDQEMIEPIKENMTAIEESVDSKLITEPGIELENIIEQQEATMDSLKVQDTIENAQKVEIQSRNLNYDITFFHIPIKDKAEFNYVKFVLEISGLTGKDCLSSWHSSDHPVDPLLYEEMENDLDFCTYGGSGQCNHHVLFDLINETLLELSGRCHCCCSIPFSSSHPMPKGCHTLHQVWIHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPKLYAQCVSLELEDFILHDLLEEISCDLACI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01198 656 Pfam Domain of unknown function (DUF4378) 495 648 IPR025486 -
Vian9g01198 656 PANTHER PROTEIN TRM32 40 653 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01198 Vian-Chr9 25147620 25149885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01198 31 642 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.591 2.51e-49 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01198 - - gmx:121174644 879.782