Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01174 ATGGCACCACCATTGTTCAATTGGGGGGTGAAGGACACCCACAGGGGAACCCTTGTGGTGGTGAAGATGAAGAACCCAAATTGGCCGGTTGTGGAACTGGAAGATCCCGAAGAAGATCACTTAATGACACCAACTTCTCGCACGAGTGTTTCACGAGATAAAGGAAAAGGAAGAGGCAAAAATGTGAAACAACTCACATGGGTTCTTCTGCTCAAAGCACATCCCGCCGTCGGTTGCCTGACCTCCCTGGCGCCAACATTGATGGGGTTTGGGATTTCAAGATCCATTGGTGATGCCTACCTAAAGAAGGTAGAGTTTAATAGAGCACCATTATTGTCAAAATTTCGACTCCCAGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAGCAATACTAGTACAAAAATTGTGTCCTCAAGAAGAAGTTGACATTGGAGTGGCAAAGAAACTTGTGAAAACAAAACTTTGTGAAGCTGCGAAGAAAGGAGAAACAAGATACTTAGACTTGAAAAAGATTGACAAAGGGGTGAGGAGACATTTCCACGATGACATCACTGTTATAGTTTTGTATCTTGATTCAAAATTTTTGGCTCGTGCCAATTCTCGTGTACCCTTGGTTTCTATCAAAGGAGGTGGTGAAAATGGTTGTTGTTTAAGGAAGTATTTGGGGTTTGAAGAGAATTTAGTTTTGAAGGTTGAAGATGAACATGTGGCAGTAGGAGTGACAGTGGCAGAGTGA 741 0.4332 MAPPLFNWGVKDTHRGTLVVVKMKNPNWPVVELEDPEEDHLMTPTSRTSVSRDKGKGRGKNVKQLTWVLLLKAHPAVGCLTSLAPTLMGFGISRSIGDAYLKKVEFNRAPLLSKFRLPEPFEQPILKAEPAILVQKLCPQEEVDIGVAKKLVKTKLCEAAKKGETRYLDLKKIDKGVRRHFHDDITVIVLYLDSKFLARANSRVPLVSIKGGGENGCCLRKYLGFEENLVLKVEDEHVAVGVTVAE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01174 246 SUPERFAMILY PP2C-like 89 193 IPR036457 -
Vian9g01174 246 Gene3D - 69 203 IPR036457 -
Vian9g01174 246 MobiDBLite consensus disorder prediction 36 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01174 Vian-Chr9 24583505 24584699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01174 92 214 PP2C-type Phosphatase Gene Family AT3G12620 59.459 1.74e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01174 K01102 - gmx:100807559 197.978