Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01171 ATGGCAATAAAAACATATGTCATTGTTTTCCTTCTTCATGTGTTTCCCCTATGTTGCTACCTCCACAACTACGTTGCTTCCTCCTTTGCTGCCTCCAACCACTTCAGACGGTGCCTCCATTTAATTGCATTGAGGGTGGTGCATCTCGCTGCCTCCAATGACGCCGGTGCTCTCTCCATCGTTGCTCCCACCGCTGCCTCCAACGACCACGGTGCCTTCATTTTTGTCGCGGTAAGGGTTGTGTATCTCGTTGCCTCTAACGACGTTTCTGCGTTTATGCTCCCTCCGCCGCCTCCTCCCTCTGACGCTGCCTCCATATCTTTGGCGCATTGCTCTCCACTTCGCTCCTACAAGAACGTGATCAGAGCACGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAAAAGGAAGAGAGCCGCGACAATGAGGATCATGTCACCGTCATCCGCGACTACCGATCTAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCAACTCTCGCCTTATTCTCTCGGCTTCCTCCGACGATTCTAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGTTCCAACATCGGTAAGGTCCAAATCATCCATTCCCACCTCGTGTATTCTCTCACCCTCCCAAGGCTTTACTCTGCCATTCTCGAATTCAAAATGGGAGACTCCTCTGCCTATCTCCGCAACGGAACCCCATTGTACGTCCTCCTAAGGAGCAATCTGGTGCATAGCGAGTTTCATGAGGTTGAAAGTAGGGGAAAGGGGACCGATAGGGGTCTGATAGTGAAAACTAACCCAACGACTGGAGGCAGAGTCGACGGTAGAAGCGTCGGACTCGTCGCACTGGGGATGGTGGAAGTCGCGAAGTACTGGCGGCGCGAGGGACTGGAGGGGGCAGAGGTGGTGAAAAAAGGGTGGCGGAAGGAAGCGTTGGAGAGGGAATCAAAGTCAGCCTTGCGCTTGGAGGAAGGCACTAGACTCGGGAATGATGAAGATTGTGGACTTGGCTTAATCGAGGAACACACGCTTATGTTGGGTGGAGTGCCTCCAATCTCACTTCCCGTGGGTCTCTTGCATCCCTGTGTCAACATAAATGGTAGTGCCATCTTCTTCCACGATCACATTGCTTTTGATGAAGCGATTGCTGAATTGGATACACTGGGAGAGGAATCATACAAGGATAGTACTTTGATCATGCAACTGCTTCGTGATAACCTCACCCTTTAG 1254 0.5199 MAIKTYVIVFLLHVFPLCCYLHNYVASSFAASNHFRRCLHLIALRVVHLAASNDAGALSIVAPTAASNDHGAFIFVAVRVVYLVASNDVSAFMLPPPPPPSDAASISLAHCSPLRSYKNVIRARRASWRIISSIEQKEESRDNEDHVTVIRDYRSKIESELSNICDGILKLLNSRLILSASSDDSKVFYLKMKGDYHSSNIGKVQIIHSHLVYSLTLPRLYSAILEFKMGDSSAYLRNGTPLYVLLRSNLVHSEFHEVESRGKGTDRGLIVKTNPTTGGRVDGRSVGLVALGMVEVAKYWRREGLEGAEVVKKGWRKEALERESKSALRLEEGTRLGNDEDCGLGLIEEHTLMLGGVPPISLPVGLLHPCVNINGSAIFFHDHIAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01171 417 Pfam 14-3-3 protein 385 417 IPR023410 -
Vian9g01171 417 Pfam 14-3-3 protein 116 197 IPR023410 -
Vian9g01171 417 SUPERFAMILY 14-3-3 protein 385 417 IPR036815 -
Vian9g01171 417 Gene3D - 114 200 IPR036815 -
Vian9g01171 417 PRINTS 14-3-3 protein zeta signature 104 133 IPR000308 -
Vian9g01171 417 PRINTS 14-3-3 protein zeta signature 184 206 IPR000308 -
Vian9g01171 417 PRINTS 14-3-3 protein zeta signature 153 177 IPR000308 -
Vian9g01171 417 PANTHER 14-3-3 PROTEIN 385 417 IPR000308 -
Vian9g01171 417 Gene3D - 370 417 IPR036815 -
Vian9g01171 417 SMART 1433_4 70 417 IPR023410 -
Vian9g01171 417 SUPERFAMILY 14-3-3 protein 116 197 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01171 Vian-Chr9 24512115 24515235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01171 385 417 14-3-3 family AT1G78300 100.000 1.35e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01171 K06630 - zju:107420766 144.821