Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01162 ATGGATGAAGCTGTTTTGGGATCGTCCGGCTCCGCTTCGAAGGCCGAGGATGACAGCGTCAATGAGGATGAAGGCTGGGTTCTACCAATTGAAAAGGTGACTTCTTTTTACTGGGAAATGGGGGAGAAGGAAGGAGCTGGGAAATGGGGGCCGAGGATGGCAGCGTCAAATGAGGATTTTCTTTCATTTTTTTCCATTTGTTATGCTGGTTTTATCTGGCAAAAGAAGTTGGGTCATATGGTAGTTCAGGATTTGGGGTGTGGGGAGGAGACTGAGGTGGAATGGGGATGGTGTGGGCAGAGACTTCATTTTCGAATCATCCCTGTCATCTTCATTTTCACGAACAATCTTACGAGCAAACGCCCTGATGCCGTCGACGTGCGCCATCGCCTCCACGCCATCGACTCCATCTCCTCCACGCCGTTGATGCCATCGCCTCCCGACATCCGCAGCACCGTTGCGTCGTCGTCTCCCACACACCGTGAACGAAAGACACTGTGGCACTTCTTGCTGCATGTGTACACAGGGGTTTCAAGAAGAGGTGTATCGCAGTGCAATAAGAATGTTACGGCTGATTTCAATGGTTTTCTAGATAGAGCATTTAGAGTTGAGTGTCTTTGCTCAGGGGATATCAAGCCAGGCAATTTGTTACTTGAAAGATACGGTTACTTGAAATTGTCAGATTTTTTACTTTGTAAACCATTAGATCGCAATACACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGAACTCCACAAAACGAAGAGTGGACAACTCCTAAACGTTCACGACAAGAACAACTTCAACATTGCCCTGGAGTTTCTCAGTGGAATCTCCACCAGGCTTATTCCACAGTTAGTACACCAGATTATATTGCTCCAAAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGA 936 0.4637 MDEAVLGSSGSASKAEDDSVNEDEGWVLPIEKVTSFYWEMGEKEGAGKWGPRMAASNEDFLSFFSICYAGFIWQKKLGHMVVQDLGCGEETEVEWGWCGQRLHFRIIPVIFIFTNNLTSKRPDAVDVRHRLHAIDSISSTPLMPSPPDIRSTVASSSPTHRERKTLWHFLLHVYTGVSRRGVSQCNKNVTADFNGFLDRAFRVECLCSGDIKPGNLLLERYGYLKLSDFLLCKPLDRNTLEEKDFSVGQNVNGTPQNEEWTTPKRSRQEQLQHCPGVSQWNLHQAYSTVSTPDYIAPKVLLKKGYGMECDW 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01162 311 Gene3D Transferase(Phosphotransferase) domain 1 202 311 - -
Vian9g01162 311 ProSiteProfiles Protein kinase domain profile. 38 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g01162 311 PANTHER SERINE/THREONINE-PROTEIN KINASE 210 311 - -
Vian9g01162 311 MobiDBLite consensus disorder prediction 1 22 - -
Vian9g01162 311 SUPERFAMILY Protein kinase-like (PK-like) 210 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01162 Vian-Chr9 24304987 24314385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01162 210 311 AGC Kinase Gene Family AT1G03920 60.952 2.68e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01162 K08790 - gmx:100779528 146.747