Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01139 ATGGAATTGGCGTCTTCATCATCCAAACTGCAACGGAAGTACGATGTGCTCATCAACTTCACTGAAATAGAAGACATTCGCAAGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTAATGGGCTCACCACTTTCCTTCACCACGAGAATGCATTGCAGCCATTGCACATCCAACAACCTATTCTTCATCTGTGTCGGGTAGCAATTGTTGTTTTCACCAAAACTTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATAATTGAATGGCACCAAACTTATTCCCGACATGTTCTGCCCGTATATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAGAAGCCTTTAAAGCAACTGCACACCAAACATTTTCTGAACAACAACTGGAGGATGGCGTGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCGAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCAGAACTAGTGGACACAATTGTTAAGAGCGTTCTTAATTTACCAGTCTTGTCTGTTACTAAATTTCCAGTTGGATTGCAATCCCAAGTGGAAGATGTGATTCGAACTATAAAAAATAAATCAATGGAAGTGTGTAGGATAGGGATATGTGGAATGGAAGGATCGGGTAAAACGACCCTTGCCAAAGCCATCTACAATCAAATTCATGGTACATTCATGGAGAAAAGTTTCATTGAAGATGTTTCAGAAGTCAATCGAACAAGAGGGTGTATTCATTTACAAGCACAACTTCTTTCAGATGTCCTAAAATCAAGAGTGGAGATTCATAGCGTTGAGATGGGAACAAGTATGATTCAGGAAAGACTTCATGGGAAAAGGATGCTAATTGTACTCGACGATATGATCAATGAGTACTATCCATTATTCGACCTTAGGAAATGTTGTGCATGGTTCGGTAAAGGAACTGTAATTATCATCACAACAAAAGATATAGAGCTACTGAGGAAGCACCAAGTTGATTCTATTTTTCGGATGAATCTAATGAATGCAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCATTTCGAGAAGCAAAACCAAAAGAAGAATACAGCGACCTTGCAAAAACAGTAGTTACTTATTGTGGAGGACTACCTCTTGCGCTTGAACTCATTGGAGCTTGTTTATTTGAAAGGACGAAAGAAGAATGGAACAGAGTATTGTTAAGATTAGACAATAAGATTTATTCTTTGATGTATGTTGTTCCACTGATATTGAAAATAAGCTTCGACGGTTTACGGAATAAAATCGAAAAAGATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAGGCAGAGCCTATGTTAAGAAGATGCTGAATGGCTGTGGAGTTGACCCTGATAGTGGAATAAGAGTTCTGATAGAGCGTAACCTCATAAAAGTTAAAAAGAACAACAAATTTGGAATGCATCCTTTGCTACGAGATATGGGAAGAGGAATTATTCGTGAAAATTCAAAAGAGGAACCTGGGAAGAACAGTCGAATGTGGTATGATAGTGATGCAGAATATGCACTGTCAGAGAATACACTATTTTCATCGCAGAGGACAAAAGTCATTCAAGGATTGCCTGAGAAACTGTTTTTAACCAGTACAGATGGCTTCAAACCTTCTCCTTTAAAGGAAACAAACACATCAAGAATGTTGAAACTCACCGGAGATTCTGGGTACGTTTCTAAGAAATTGAGATGGATCAGTTTGCGAGGATTTCCTTCAGAATACCTACGTAACAATTTTTATCTCCATGATGCAATAGCAATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAACAACCCCAGGTTTTGCTTTGGCTAAAAGTTCTTAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGACTTTATCGGACTACCACGTCTTGAACAACTCATTCTCAAAGATTGTCCACGTTTGAACGAAGTACACCAATCTATTGGATGTCTTTGCTATCTTACACTGCTAAATTTAAAGGACTGTACAAGGCTAAGCAATCTCCCAAAAGAGATATATGAGTTGACAACTTTGCAAACTCTCATTCTTTCTGGTTGTTCGAAAATTGACCTATTGAAAAAAGATATAATGCAAATGGAATCCTTGGTAACTCTAATTGCTGAAAATACAGTTGTGAAACAATTGCCTTTTTCAATGGTAAGTTCAAAAAGCATTGGATATATATCTTTATGTGGACTTGAGGGATTGTCACATAATCTCTTTCCTTCTATCATTCGGTCTTGGATGTCATCAACAATGAATAAGCTGTCTCATAAACATTCGTTTTGCATGGATATGGAAGATAATAGTTGGGATGATTTTGTGCCATTTCTTAGCAGTCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGATACCGAATTTCAACTATCTAAGCAAGTAGAAACTATTCTGATTGAATATGGAGCAAATATTACAGAATCAGGAACTTCAAAGCAGCACTTCAAGTCTTCTTTGATTGGTGTTGGTAGATGCAAAGATTTCTTCAATGCTGTCAGTGATAGAATTTCTGAGGTATTTGCAAGCAGTGAGTCATGTGATATTTCTCTTCCAAGTGACAATGATCCTTATTGGTTGGCGCATAGAGGTGAAGGACATTCTGTTTCTTTCACTGTGCCTCAGAACCGTGTATTGAAGGGAATGGCTTTATGTGTTGTTTATTTATCAAATCCTGAAATTCTGACAACTGAATGTTTTAGAAGCGTCTTAATTGTTAATTACACAAAGTGCGCATTACATATGCACAACCATGGGATGGTAATTATCTTTAATGATATAGATTGGCAAGGTATAATATCAAATTTAGGATCAGGAGACAAGGTGGATATTTTTGTGATATTTGGTCATGGAGTTCTAGTCAAAAGAACAATTGTCTATCTGATATGTGGTGAATCAAATGACATACAAAAGGAGCCTGCGACAAAGAAAAATTCCCTCACTAGATTTATAAAGAAAAAGGAAAAGTGA 3045 0.3764 MELASSSSKLQRKYDVLINFTEIEDIRKKFVSHLDSALSANGLTTFLHHENALQPLHIQQPILHLCRVAIVVFTKTYSQSAWCLHQLQQIIEWHQTYSRHVLPVYYEIEPSDVRLQKGDFGEAFKATAHQTFSEQQLEDGVSRWSHALTKAANFFGWDESNHRSDAELVDTIVKSVLNLPVLSVTKFPVGLQSQVEDVIRTIKNKSMEVCRIGICGMEGSGKTTLAKAIYNQIHGTFMEKSFIEDVSEVNRTRGCIHLQAQLLSDVLKSRVEIHSVEMGTSMIQERLHGKRMLIVLDDMINEYYPLFDLRKCCAWFGKGTVIIITTKDIELLRKHQVDSIFRMNLMNANESLELFSWHAFREAKPKEEYSDLAKTVVTYCGGLPLALELIGACLFERTKEEWNRVLLRLDNKIYSLMYVVPLILKISFDGLRNKIEKDLFLDICCFFVGKGRAYVKKMLNGCGVDPDSGIRVLIERNLIKVKKNNKFGMHPLLRDMGRGIIRENSKEEPGKNSRMWYDSDAEYALSENTLFSSQRTKVIQGLPEKLFLTSTDGFKPSPLKETNTSRMLKLTGDSGYVSKKLRWISLRGFPSEYLRNNFYLHDAIAIDLKHSLLRFVWKQPQVLLWLKVLNLSHSKYLTKTPDFIGLPRLEQLILKDCPRLNEVHQSIGCLCYLTLLNLKDCTRLSNLPKEIYELTTLQTLILSGCSKIDLLKKDIMQMESLVTLIAENTVVKQLPFSMVSSKSIGYISLCGLEGLSHNLFPSIIRSWMSSTMNKLSHKHSFCMDMEDNSWDDFVPFLSSLANLRSVLVQCDTEFQLSKQVETILIEYGANITESGTSKQHFKSSLIGVGRCKDFFNAVSDRISEVFASSESCDISLPSDNDPYWLAHRGEGHSVSFTVPQNRVLKGMALCVVYLSNPEILTTECFRSVLIVNYTKCALHMHNHGMVIIFNDIDWQGIISNLGSGDKVDIFVIFGHGVLVKRTIVYLICGESNDIQKEPATKKNSLTRFIKKKEK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01139 1014 Gene3D - 6 175 IPR035897 -
Vian9g01139 1014 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Vian9g01139 1014 Pfam NB-ARC domain 193 413 IPR002182 GO:0043531
Vian9g01139 1014 Gene3D - 346 432 IPR042197 -
Vian9g01139 1014 PRINTS Disease resistance protein signature 692 708 - -
Vian9g01139 1014 PRINTS Disease resistance protein signature 211 226 - -
Vian9g01139 1014 PRINTS Disease resistance protein signature 286 300 - -
Vian9g01139 1014 PRINTS Disease resistance protein signature 380 394 - -
Vian9g01139 1014 Gene3D Ribonuclease Inhibitor 559 719 IPR032675 -
Vian9g01139 1014 SMART till_3 13 154 IPR000157 GO:0007165
Vian9g01139 1014 Pfam TIR domain 13 177 IPR000157 GO:0007165
Vian9g01139 1014 Gene3D - 176 340 IPR027417 -
Vian9g01139 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 737 IPR044974 GO:0006952
Vian9g01139 1014 SUPERFAMILY L domain-like 489 805 - -
Vian9g01139 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 443 IPR027417 -
Vian9g01139 1014 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01139 Vian-Chr9 23855291 23858816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01139 12 708 WRKY Transcription Factor Family AT4G12020 27.601 1.78e-65 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01139 - - vun:114165123 1450.26