Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01114 ATGACAGGAATGAATGTAGATGAATCTATTGAGCTGTTTAGTTGGCATGCATTCAAACAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAACGTAGTTGCTTATGCTGGGGGCTTGCCACTTGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGATAACAGAATGGAAGAGTGTATTGGAAAAACTTAGGAAAATTCCTAATGATGAAGTACAGGAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACTGAGAAAGGAATATTCCTTGATATAGCATGTTTCTTTATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCGCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGTCTTGTAACTGTGGATGATAAGAACCAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGCAGGTTATGGTTTCATGAGGATGTGCTTGATGTGTTATCAAAAGAAACTGGAACAAAATTTATTGAGGGATTGACTTTGAAGTTACCTAGAACTAATACAAAATCTCTGTGCACTAAAGCATTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGACCTGATATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCAACAAGCTTTTATCAAGGAAGTCTAGTTTCTATTGAGTTAGAAAATAGTAAGATTACCATGGTGTGGAAAGCGACTCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAGACACCAGACTTTTTGAATTTGCCCAATGTTGAAAAGCTTATACTCATGGATTGTCCAAGGCTGTCTGAAATTTCATATACCATTGGTCATCTCACCAAAGTTCTACTAATAAACTTTCAAGATTGTATTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCGGGTTGTCTAAAGATTGATAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGACAAGACTGCTATAAGAAGGGTGCCCTTTTCAATAGTCAGATCTAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTGTCTTCTCGTGTTCAAACATTGGTAGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGCAGTTCCAATCAGCTATCATATATATCTGAGGAACTTCCAAAGCTTCAAAGTCTTTGGATAGAGTGTGGTTCTGATCTTCAACTTTCTCGAGATACAACGAGTATTTTGGATGCTTTAAATGCGACAAATTCTGAAGAATCGGAGTCATATGGAACAACATCACAAATGCAGAATGTATTTACGTTAATTGAATGCAATTCAAGATCTAAATTGTTTGAGAAGACACTTTTAATTCAGATGGGAAGGAGTTGGGAAATCACACATATTCTGAAACAGAGAATTTTACAGAATGTAACTACGAGTGATGGCGGTGATTTGCTACCTGGCGATTGTTATCCAGATTGGTTAACCTTCAGCAGCGAAGGTTCTTCTGTGACTTTTGAAATTCCTGAAGTGAATGGGCGTAGCTTGAAGACAATGATGTGCCATATCCATTATTCTTCCTCAGACAGTATAACATCAGACGGCCTGAAAAATTTGTCGGTGATAAATCACACAAAGAGCACCATTCAGCTTTATAAGAGAAATGCATTAGCGTCGTTTGATGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTATTGTTGTTTTCTGGAGCAGAATAACTGTTAACAAGACGTCAATTTATCTTATATATGAGGCAATTGATGAAAAAGTAGAGCACTATCATGCTCCAAATATGAATGTTCCTAGGTCGATCTCTCCCGGAGTGGAATCCATGGAGGACTTGAGGGGTTCTTCCGTTAAAAGCTTAACTAAACGCTTATTGAACAAATTCTTATCACGTAAATACTTTTGTAAAGGGAAAGTTGAAAAGTAG 2193 0.3694 MTGMNVDESIELFSWHAFKQASPKEDFIELSRNVVAYAGGLPLALEVLGSYLFDMEITEWKSVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVTVDDKNQLGMHDLLRDMGREIIRSKSPMELEERSRLWFHEDVLDVLSKETGTKFIEGLTLKLPRTNTKSLCTKAFMNMKKLRLLQLSGVELVGDFEYLSKDLIWLCWHGFPFAFIPTSFYQGSLVSIELENSKITMVWKATQLMEKLKILNLSHSHYLTKTPDFLNLPNVEKLILMDCPRLSEISYTIGHLTKVLLINFQDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLVADKTAIRRVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVQTLVDMSSLVSLDVQNSSSNQLSYISEELPKLQSLWIECGSDLQLSRDTTSILDALNATNSEESESYGTTSQMQNVFTLIECNSRSKLFEKTLLIQMGRSWEITHILKQRILQNVTTSDGGDLLPGDCYPDWLTFSSEGSSVTFEIPEVNGRSLKTMMCHIHYSSSDSITSDGLKNLSVINHTKSTIQLYKRNALASFDDEEWQRVLSNIEPGNKVQIIVVFWSRITVNKTSIYLIYEAIDEKVEHYHAPNMNVPRSISPGVESMEDLRGSSVKSLTKRLLNKFLSRKYFCKGKVEK 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01114 730 Gene3D Ribonuclease Inhibitor 177 340 IPR032675 -
Vian9g01114 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 490 IPR044974 GO:0006952
Vian9g01114 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 98 IPR027417 -
Vian9g01114 730 Gene3D - 4 87 IPR042197 -
Vian9g01114 730 PRINTS Disease resistance protein signature 347 363 - -
Vian9g01114 730 PRINTS Disease resistance protein signature 38 52 - -
Vian9g01114 730 Pfam NB-ARC domain 4 75 IPR002182 GO:0043531
Vian9g01114 730 SUPERFAMILY L domain-like 144 470 - -
Vian9g01114 730 Gene3D Ribonuclease Inhibitor 341 495 IPR032675 -
Vian9g01114 730 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01114 Vian-Chr9 23180198 23184663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01114 1 343 WRKY Transcription Factor Family AT5G45050 34.865 3.33e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01114 - - var:108322530 1446.03