Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01111 ATGACAGGAATGAATATAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAACAAGCAAGTCCCAAAGAAGATTTTATGGAACTTTCAAGAAACGTAGTTGCTTATGCTGGGGGCTTGCCACTTGCTCTTGAAGTCCTTGGGTCGTATTTGTTTGATATGGAGGTAACAGAATGGAAGAGTGTATTGGAAAAACTTAGGAAAATTCCTAACGATGAAGTACAGGAGAAATTAAAAATAAGCTATGATGGTTTAAGTGATGATACTGAGAAAGGAATTTTCCTTGATATAGCATGTTTCTTTATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCGCTGAAAATGGAATACGTGTCTTGGTGGAGCGAAGTCTTGTAACTGTGGATGATAGGAACCAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCTCCAATGGAGCTCGAGGAGCGTAGCAGGTTATGGTTTCATGAGGATGTGCTTGATGTGTTATCAAAAGAAACTGGAACAAAATTTATTGAGGGATTGACTTTGAAGTTACCTAGAAGTAATACAAAAACTCTGTGCACTAAAGCATTTGTGAACATGAAGAAACTCAGGTTGCTGCACCTTTCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGACCTGAGATGGCTTTGTTGGCATGGATTTCCTTTTTCCTTCATACCAACAGGCTTTTATCAAGGAAGTCTAGTTTCTATAGAGTTAGAAAACAGTAAGATTACCATGGTGTGGAAAGAGACTCAGCTGATTGAGACGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAGACACCAGACTTTTTGAATTTGCCTAATCTTGAAAAGCTTATACTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACCAAAGTTCTACTGATAAACTTTCAAGATTGTATTAGCCTTCGGAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCGGGTTGTCTAAAGATTGATAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGACAAGACTGCTATAAGAAGGGTGCCCTTTTCAATAGTCAGATCTAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCCCGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTGTCTTCTCGTGTTGAAACATTGGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGCAGTTCCAATCAGCTATCATATATATATGAGGAACTTCCAAAGCTTCAAAGTCTTTGGATAGAGTGTGGTTCGGATCTTCAACTTTCTCGAGATATAACGAGTATTTTGGATGTTTTAAATGCGACAAATTCTGAAGAATCGGAGTCATATGGAACAACATCACAAATGCACAATGTATTTACATTAATTGAATGCAATTCAAGATCAAAATTGTTTGAGAAGAGACTTTTAATTCAGATGGGAAGGAGTTCGGAAATCACACATATTCTGAAACAGGGAATTTTACAGAATATAACTACGAGTGATGGCGGTGATTGTTTGCTACCTGGTGATTATTATCCAGATTGGTTAACCTTCAGCAACGAAGGTTCTTCTGTGACTTTTGAAATTCCTGAAGTGAATGGGCGTAGCTTGAAGACAATGATGTGCCATATCCATTATTCTTCCTCAGACAGTATAACATCAGACGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGAGCACCATTCAGCTTTATAAGAGAAATGCATTAGCGTCGTTTGATGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAACATAACTGTTAACAAGACGTCAATTTATCTTATATATGAGGCAATTGATGAAAAAGTAGAGCACTATCATGCATCAAATATGAATGTTCCTAGGTCGATCTCTCTCAAAGTGGAATCCATGGAGGATGCTTCCGTTCAAAGCTTAATTAAACGCTTATTGAACAAATTCTTATCATGTTTCTGTATATAA 2163 0.3685 MTGMNIDESIELFSWHAFKQASPKEDFMELSRNVVAYAGGLPLALEVLGSYLFDMEVTEWKSVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVTVDDRNQLGMHDLLRDMGREIIRSKSPMELEERSRLWFHEDVLDVLSKETGTKFIEGLTLKLPRSNTKTLCTKAFVNMKKLRLLHLSGVELVGDFEYLSKDLRWLCWHGFPFSFIPTGFYQGSLVSIELENSKITMVWKETQLIETLKILNLSHSHYLTKTPDFLNLPNLEKLILMDCPRLSEVSYTIGHLTKVLLINFQDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLVADKTAIRRVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVETLVDMSSLVSLDVQNSSSNQLSYIYEELPKLQSLWIECGSDLQLSRDITSILDVLNATNSEESESYGTTSQMHNVFTLIECNSRSKLFEKRLLIQMGRSSEITHILKQGILQNITTSDGGDCLLPGDYYPDWLTFSNEGSSVTFEIPEVNGRSLKTMMCHIHYSSSDSITSDGLKNLLVINHTKSTIQLYKRNALASFDDEEWQRVLSNIEPGNKVQIVVVFWNITVNKTSIYLIYEAIDEKVEHYHASNMNVPRSISLKVESMEDASVQSLIKRLLNKFLSCFCI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01111 720 Gene3D Ribonuclease Inhibitor 186 341 IPR032675 -
Vian9g01111 720 Gene3D Ribonuclease Inhibitor 342 493 IPR032675 -
Vian9g01111 720 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 87 - -
Vian9g01111 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 98 IPR027417 -
Vian9g01111 720 SUPERFAMILY "Winged helix" DNA-binding domain 73 180 IPR036390 -
Vian9g01111 720 Gene3D - 4 87 IPR042197 -
Vian9g01111 720 PRINTS Disease resistance protein signature 38 52 - -
Vian9g01111 720 PRINTS Disease resistance protein signature 347 363 - -
Vian9g01111 720 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 486 IPR044974 GO:0006952
Vian9g01111 720 SUPERFAMILY L domain-like 192 477 - -
Vian9g01111 720 Pfam NB-ARC domain 4 75 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01111 Vian-Chr9 23063214 23076201 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01111 1 343 WRKY Transcription Factor Family AT5G45050 34.677 1.15e-46 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01111 - - var:108322530 1338.94