Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01103 ATGGCTTCCTCAAGTGGAAGAGAAACATCGTCAGGATCGTCCACGATTCAAAATTCTGGTTCAGAGGAGGATGTAGAGGCGCAGATGGATCAGAGGAAGAGGAAGAGAATGACATCGAACCGGGAATCAGCGAGGAAGTATCGAATGAGGAAACAGAGGCACTTGGAAGGTCTGGTTGCAACGGTGGCTCAGCTCAAGAATGAGAATCAGCGTATTAGCCAATCAATCAATATCGCTAATCAACGTATGAAGAATTCTGAAATTGATAACTCAGTTCTGAGAGCAGAAATGACTAAAACTCTTACAGAGGAAAGTGAGAAGCAGCGTTGGATGGAGACACTTCGTGAAGCTGCCAGCATCTCAGGGATTGTAGTCCTAAATTCCAGAAATGAGAGTGAGGCTATCAAAAGCATTATTGAAAATGTTACACTCTATGGGAGGAGACCCGAGAAAGACATCAATAGTGTAGAATGCTCCCTTTCATCTTTTGTTGGTATTATTGAAGCAAGACTTTCTTGGAGTTTTGACAACCCCGATAAAGAAGAAAATCACCCCATGCTTCCTGTCTTCAGCCGGAGTCTTACCCCTTCTTCCTCACTTTATTAG 606 0.4356 MASSSGRETSSGSSTIQNSGSEEDVEAQMDQRKRKRMTSNRESARKYRMRKQRHLEGLVATVAQLKNENQRISQSINIANQRMKNSEIDNSVLRAEMTKTLTEESEKQRWMETLREAASISGIVVLNSRNESEAIKSIIENVTLYGRRPEKDINSVECSLSSFVGIIEARLSWSFDNPDKEENHPMLPVFSRSLTPSSSLY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01103 201 Gene3D - 30 89 - -
Vian9g01103 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 77 IPR004827 GO:0003700|GO:0006355
Vian9g01103 201 FunFam BZIP transcription factor 30 81 - -
Vian9g01103 201 Coils Coil 55 82 - -
Vian9g01103 201 Pfam bZIP transcription factor 32 77 IPR004827 GO:0003700|GO:0006355
Vian9g01103 201 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Vian9g01103 201 MobiDBLite consensus disorder prediction 1 24 - -
Vian9g01103 201 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 115 - -
Vian9g01103 201 MobiDBLite consensus disorder prediction 25 45 - -
Vian9g01103 201 MobiDBLite consensus disorder prediction 1 50 - -
Vian9g01103 201 CDD bZIP_plant_GBF1 33 82 IPR045314 GO:0003700|GO:0006355
Vian9g01103 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Vian9g01103 201 SUPERFAMILY Leucine zipper domain 32 82 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01103 Vian-Chr9 22881273 22885846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01103 2 96 bZIP Transcription Factor Family AT1G75390 45.361 9.73e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian9g01103 bZIP_1 6.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01103 K25786 - var:108322522 181.8