Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01063 ATGGAGGTGATGGAGAATGGTGGTGCAAACATGAAGGGGTTGTTGAACAAGGAGATGAGACATGGAAGAACAGCACATAACATGTCATCTTCTTCACTGCGCAAAAAATCTGACCTAACTCTTGTGTCTAAGGTTAATTTTGGTCCTCTAAAAGACATGTTGGTGAACATTCAAGAGGTTGTTCTGGGAACCAAACTCTCTATTCTCTTACCAGCTGTTCCAATTGCCATTATTGCTCAATGTTATGGATTTGGAAGACCTTGGGTTTTTGCATTGAGTTTATTGGGGCTTACCCCACTTGCTGAAAGACTCAGTTTCTTGACAGAACAAATTGCTTGCTACACTGGTCCCACAGTGGGAGGACTTATGAATGCAACATGTGGGAATAGTACAGAGCTCATTATAGCAATTTTTGCCCTTAGCCATAATAACATTGCTTTGGTCAAATATTCTCTTCTGGGTTCTGTAATTTCTAATCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTGGAGGTCTTGTAAACCTTAGAGAGGAGCAGAAATATGATAGAAGACAAGCAGATATAAACTTGCTTATGCTGTTTGTGGCATTGCATTGTCATTTGCTGCCAATGCTGTTCCATTATGCTGGTGTCTCAGAAGGTGTCACTGCAGAATCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTATTATGGTGATAGCATATTTTGCCTACCTTGTGTTCCAGCTTTGGACTCACAGACAACTATTTGAAAACCACGATCAAAATGAAGAAGAGGGTGACACTGATTCAGATGCAGCAGTGATAGGATTCTGGAGTGGGTGTGTTTGGCTGGTTGGGATCACTGTGATCATTGCAGTGCTTTCTGAATATGTGGTGGAAACAATTGAGGATGCATCTAATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGTAATGCAGCAGAACATGCTGGATCAATCATATTTGCTTTCAAGAACAAACTGGACATTTCTTTGGGTGTTTGTCTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTTTGTGTGATTGTTGCTTGGATTCTGGGAATTGAAATGGACCTCAGCTTCAACCTCTTAGAAACAGGTTCACTTGCTTTGGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGTCTTGTGCTATTTCTGTGCTACATTATCATTGGGACATGCTTTTTCGTACAAAGAACACCTTCTGACAAAAATAATGCTTCCAGCATAATGCTCAAATCAACAAGGGAAGCAGTTTTCAGCGTTTAA 1335 0.4097 MEVMENGGANMKGLLNKEMRHGRTAHNMSSSSLRKKSDLTLVSKVNFGPLKDMLVNIQEVVLGTKLSILLPAVPIAIIAQCYGFGRPWVFALSLLGLTPLAERLSFLTEQIACYTGPTVGGLMNATCGNSTELIIAIFALSHNNIALVKYSLLGSVISNLLLVLGTSLFCGGLVNLREEQKYDRRQADINLLMLFVALHCHLLPMLFHYAGVSEGVTAESSLQLSRAASIIMVIAYFAYLVFQLWTHRQLFENHDQNEEEGDTDSDAAVIGFWSGCVWLVGITVIIAVLSEYVVETIEDASNSWGLSVSFLSIILLPIVGNAAEHAGSIIFAFKNKLDISLGVCLGSATQISMFVVPLCVIVAWILGIEMDLSFNLLETGSLALAIITTAFTLQDGTSHYMKGLVLFLCYIIIGTCFFVQRTPSDKNNASSIMLKSTREAVFSV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01063 444 Pfam Sodium/calcium exchanger protein 277 413 IPR004837 GO:0016020|GO:0055085
Vian9g01063 444 Pfam Sodium/calcium exchanger protein 88 245 IPR004837 GO:0016020|GO:0055085
Vian9g01063 444 NCBIfam calcium/proton exchanger 51 418 - -
Vian9g01063 444 NCBIfam calcium/proton exchanger 69 418 IPR004798 GO:0006816|GO:0015369
Vian9g01063 444 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 422 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vian9g01063 444 Gene3D - 263 418 IPR044880 -
Vian9g01063 444 Gene3D - 117 256 IPR044880 -
Vian9g01063 444 FunFam Vacuolar cation/proton exchanger 263 419 - -
Vian9g01063 444 FunFam Vacuolar cation/proton exchanger 117 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01063 Vian-Chr9 21804805 21808838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01063 3 426 Antiporters AT2G38170 66.279 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01063 K07300 - gmx:100797538 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00971 2 16571778 16574556 Vian9g01063 9 21804805 21808838 PCT