Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01032 ATGCTTCAACATAAAGAGCTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCGATTAATTTATACAGCTCACTTGGGCCACTGGATAATCTTCCGCATGGCTGCTTTGGCCAGAAGAATACAGATTCGAAAATTCAAGTTGGCATAATGAAGTTCCTAAAAAGAGCAGAGGTCCCACTTGCTGCTGCATCTACAACGAGTGGCACTGAAGAGCCTACTTCCCAGACTCCGAGAAATAATTCGTACTGCAAAGATAAGGAAGCACTTTCCTCAATTTCAGATACTGACAACTTAGAGACAAAGGAAGTAGAAAGGCAAGAAGTTGGTTCTGCTGGTTCGCATGCCAATCCAGTTTGTCCGGATGATATTCCAACTCTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAATCTTGAGAAGGCAGCTGATATTATCGTTGAGAAGGTTGCAGAGTTCTTAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTATCTCATAAGTCAAAGATTTTGTCCTTAGTTAAAGCCAGAATTGCAGAAAAAAACATGGACACCCAAAAGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGCAATGCCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCAGAACTGGAGTCTGCAACAAAAGATAAAGTAAAATCTCTTTCACCTGGGAATGCTGCTGTTGTCCCTCTGCCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATAATAAAGGCTGCAAAATTCTGCAAGATGCTTATACTTCACTCTTTGATGGTTTTGCGTCTATTGTGCGGAACCACCCAGGGATACCAGAGGGAAAAGGTGAAAAGCTTGAAAGGAAATCATTGGAGTTGCCGGTTCAGTCTGATTGTTCTTCCAGAAAATATTTTACAGGTACTGATCAAAAGAGTAAGAGAAGTGATGATCATGGATCAGAGAAAAGCAAGAAATGCAAGGGAACTCAGGATGACTTAGGATTGCCCTTTACTGATTCTAAGGGTGAAAAGGTAGATTCAGAGCATAGAAGAATAGAGAGGAGCAGGAGTAAGGCTTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTGAAAAGCATAAGGGTGATTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATCTATCCAAAGGCGCAGAAGCATGTTCTGGTGTTGGCACGAACTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACATGATGCACGATGTGGGTTTAAAGTGGGCTGAGAAGTTCTTAAGCGAGAATGCTTCTCTGGTATTTCGACTTGGGTATCACTCGGTATGCAGAATGTATATTGAAGAGCTATTTTTCCTCTATCCTGCCCAAACAACAGGAAAAGAATGTTCTCTTTTTATTAATGAGTGA 1620 0.4105 MLQHKELPKLSEGFNRITFCQNENDVKNAINLYSSLGPLDNLPHGCFGQKNTDSKIQVGIMKFLKRAEVPLAAASTTSGTEEPTSQTPRNNSYCKDKEALSSISDTDNLETKEVERQEVGSAGSHANPVCPDDIPTLAFPSISTSDFQFNLEKAADIIVEKVAEFLNKFRNARLVLVDLSHKSKILSLVKARIAEKNMDTQKFFTHVGDITHLYSRGGLRCNAIANAANWRLKPGGGGVNAAIFNAAGPELESATKDKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFDGFASIVRNHPGIPEGKGEKLERKSLELPVQSDCSSRKYFTGTDQKSKRSDDHGSEKSKKCKGTQDDLGLPFTDSKGEKVDSEHRRIERSRSKAWGSWAQALHQIAMHPEKHKGDLLEISDDVVVLNDIYPKAQKHVLVLARTGGLDCLADVQKEHLQLLNMMHDVGLKWAEKFLSENASLVFRLGYHSVCRMYIEELFFLYPAQTTGKECSLFINE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01032 539 Gene3D Leucine Aminopeptidase, subunit E, domain 1 184 329 IPR043472 -
Vian9g01032 539 MobiDBLite consensus disorder prediction 364 386 - -
Vian9g01032 539 MobiDBLite consensus disorder prediction 73 99 - -
Vian9g01032 539 Gene3D Leucine Aminopeptidase, subunit E, domain 1 101 183 IPR043472 -
Vian9g01032 539 Gene3D - 415 518 IPR036265 -
Vian9g01032 539 Pfam Macro domain 225 308 IPR002589 -
Vian9g01032 539 Pfam Scavenger mRNA decapping enzyme C-term binding 427 516 - -
Vian9g01032 539 MobiDBLite consensus disorder prediction 73 128 - -
Vian9g01032 539 FunFam Transcription factor bHLH140 183 330 - -
Vian9g01032 539 ProSiteProfiles Macro domain profile. 190 428 IPR002589 -
Vian9g01032 539 SUPERFAMILY HIT-like 408 512 IPR036265 -
Vian9g01032 539 SUPERFAMILY Macro domain-like 133 178 IPR043472 -
Vian9g01032 539 SMART YBR022w_8 202 344 IPR002589 -
Vian9g01032 539 SUPERFAMILY Macro domain-like 183 322 IPR043472 -
Vian9g01032 539 MobiDBLite consensus disorder prediction 359 408 - -
Vian9g01032 539 MobiDBLite consensus disorder prediction 394 408 - -
Vian9g01032 539 PANTHER APRATAXIN-RELATED 137 515 - -
Vian9g01032 539 MobiDBLite consensus disorder prediction 100 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01032 1 515 C2H2 Transcription Factor Family AT5G01310 53.786 3.59e-180 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01032 K10863 - gmx:100786762 859.366