Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01019 ATGGCCGCAGCCCCAGCATACGAAGAAGACCTCCCTGCAGCACCGAGCTGGCTGAACAAAGGTGACAACGCGTGGCAGCTAACAGCAGCAACTCTGGTGGGTCTTCAAAGCATGCCAGGCCTAGTCATTCTCTACGCAAGCATGCCAGCTCCACCAAACAATGTGCTGCTGATGCTAACGGGTGGTGGGTTGCTGTGGATGGGATGGTCAGGGTTCAATGGTGGAGCACCTTATGCAGCCAACGTTGACGCCTCCATTGCTGTGCTCAACACTAACATTTGTGCAGCCACTAGCCTCCTTGTTTGGACCTCTCTCGATGTCATCTTTTTCTCCAAACCATCTGTCATTGGAGCTGTTCAGGGCATGATTACTGGACTCGTTTGCATCACCCCAGGAGCAGGGCTTGTGCAATCTTGGGCAGCTATAGTGATGGGAATACTTTCAGGAAGCATTCCATGGATGACTATGATGATCCTCCACAAAAAGTCAAGCTTTCTGCAGAAGGTAGATGATGCCCTAGGAGTATTTCACACACATGCAGTTGCGGGCTTATTGGGTGGCCTGCTCACAGGTCTCTTAGCAGAACCTGAGCTTTGTAGGCTCATATTGCCAGTGAGCAACTCAAGGGGTGCCTTCTATGGTGGCAGTGGTGGTGTCCAGTTTTTGAAGCAATTGGTGGCAGCATGTTTCATCACAGCATGGAACTTGGTCTCCACCACACTCATTCTTCTAGCCATACAGTTTTTCATACCCTTGAGGATGCCGGACGATCAGCTCGAGATCGGCGACGACGCCATCCACGGCGAAGAAGCCTATGCCCTATGGGGTGATGGTGAAAAATATGATCCAACCAGGCATGACTCCTCTAGAGTTGATAAAACTTCACCATCTCCCTATGTTAATGGAGCAAGGGGTTTGACCATAGACTTATGA 933 0.5059 MAAAPAYEEDLPAAPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASMPAPPNNVLLMLTGGGLLWMGWSGFNGGAPYAANVDASIAVLNTNICAATSLLVWTSLDVIFFSKPSVIGAVQGMITGLVCITPGAGLVQSWAAIVMGILSGSIPWMTMMILHKKSSFLQKVDDALGVFHTHAVAGLLGGLLTGLLAEPELCRLILPVSNSRGAFYGGSGGVQFLKQLVAACFITAWNLVSTTLILLAIQFFIPLRMPDDQLEIGDDAIHGEEAYALWGDGEKYDPTRHDSSRVDKTSPSPYVNGARGLTIDL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01019 310 PANTHER AMMONIUM TRANSPORTER MEP2 10 48 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vian9g01019 310 SUPERFAMILY Ammonium transporter 50 254 - -
Vian9g01019 310 Gene3D Ammonium transporter AmtB like domains 47 275 IPR029020 -
Vian9g01019 310 FunFam Uncharacterized protein 77 275 - -
Vian9g01019 310 Pfam Ammonium Transporter Family 50 272 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01019 Vian-Chr9 20417804 20424986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01019 51 310 Inorganic Solute Cotransporters AT2G38290 70.992 5.36e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01019 K03320 - gmx:100798599 456.062