Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01015 ATGGAGTTCGCTTATTCTTCTTCATCGTCATCATCTTCTTCCTTCTTAAAATCAGAACCCCATTTCATATACGATGTATTCATCAAATTTTGGGGAGAAGATATCGGTAAAAAGTTCGTTTCTCATCTCCATTCTGTCCTTTTACAGGAGCAAGTCAAAACTTTGATTAATGAGGAGACTCTTCAGGAGGGAATGAAGTTTGCAGAACACATGCGAGCCATAGCTGCTTCTAAGATCGTAATAATAGTTTTCACCAAAACAGACGCTAAATCTAGCAGCCGCTGTATTCTTGAGGTTGAAAAGATCCTCGAGTACCACCAAACTTTTGGCCAAATAGTTCTGTCCGTATTTTACGAGATTGACCCATTAGATGTACGTTTCCAAAAGGATGGTCTTGGAATAGCGTTAGCAAAAGCTGCACTCATAAGTTCAGGAAAAGAACTGGAATACTGGTGGTGTAGACAACCTGCAGGTATCTTTGGTTGGGATGTCAGAGATTTCAGACATGATGCTGAACTTGTGAAGGTAATTGTTAGCCATGTTCAGACATTGCTAGGCTATGCAGACATGTCTATTCCCCGATTTGCTCTTGGATTAGAGTCCCAGGTGGAAAAGGTAATTGATTGTATTGAAAATCATTCCACCGATGTCTGTGTGATAGGGATATGGGGAACGGGAGCGTCGGGTAAAACTATTTTAGCCGAAGCCATCTATAATCGAATTTATCGTTCATTCATCGGTAAGAGTTTTATTCAAAATATTAGAGACTTTTGGAATAAAGAAAATGGAACGTATGTTCAGTTGCAAGAGTCTCTTCTTTATGATGTCTTAAAATCCAAGTTCAAGGTGGAAAGCTATTTGATGGGAAGAACTGTGATCGAGAATGAACTTTCTCGAAGAAAGTTGCTCATTGTGCTTGATGGTGTGAATGAGTTTTGCCAGTTAGAAAACCTTTGTGGGAACAGTAAATGGTTCGGTCAAGGAACAGTGATAATCATTACAACTAGAGATGTTGGCCTGCTGCTCCAATTCCAAGTTAATTATGTTTATAAAATGCATTATAACCGAAACGATTCCTTTGAGCTTTTAAGTTGTTTTGCCTTTTGA 1107 0.3893 MEFAYSSSSSSSSSFLKSEPHFIYDVFIKFWGEDIGKKFVSHLHSVLLQEQVKTLINEETLQEGMKFAEHMRAIAASKIVIIVFTKTDAKSSSRCILEVEKILEYHQTFGQIVLSVFYEIDPLDVRFQKDGLGIALAKAALISSGKELEYWWCRQPAGIFGWDVRDFRHDAELVKVIVSHVQTLLGYADMSIPRFALGLESQVEKVIDCIENHSTDVCVIGIWGTGASGKTILAEAIYNRIYRSFIGKSFIQNIRDFWNKENGTYVQLQESLLYDVLKSKFKVESYLMGRTVIENELSRRKLLIVLDGVNEFCQLENLCGNSKWFGQGTVIIITTRDVGLLLQFQVNYVYKMHYNRNDSFELLSCFAF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01015 368 Pfam TIR domain 24 183 IPR000157 GO:0007165
Vian9g01015 368 ProSiteProfiles TIR domain profile. 22 185 IPR000157 GO:0007165
Vian9g01015 368 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 146 IPR035897 -
Vian9g01015 368 SMART till_3 23 184 IPR000157 GO:0007165
Vian9g01015 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 368 IPR027417 -
Vian9g01015 368 Gene3D - 17 187 IPR035897 -
Vian9g01015 368 PRINTS Disease resistance protein signature 296 310 - -
Vian9g01015 368 PRINTS Disease resistance protein signature 219 234 - -
Vian9g01015 368 Pfam NB-ARC domain 200 367 IPR002182 GO:0043531
Vian9g01015 368 Gene3D - 188 349 IPR027417 -
Vian9g01015 368 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 368 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01015 Vian-Chr9 20366173 20367383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01015 24 352 WRKY Transcription Factor Family AT4G12020 25.575 1.07e-21 95.5