Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01009 ATGGCATTAGCCGTGGTAGGTGGTGCTCTTCTCTCTGCTTTCCTCGACGTTCTTTTTGACAGGCTAGCTTCCCCTGAGCTTGTCAGCCTGATCCGTGGAAAGAAGCATGACAAGTTGCTTCAAAAGGTGGAGAACCAGCTGATAGTCCTTAGAGTTGTGCTTGCTGATGCTGAGAATCGACAAATCACAGACTCCAATGTCAAAAAATGGCTCGATGTTCTCAGAGATATTGTCTATGAGGTTGATGACTTACTTGACGAAGTTTCTACCAAAGCTGCTACTCAAAAGGAGGTAAGCAATTCCTTTTCTCACATTTTCAATAGGAAAAGGATTGTTAGTATTAATAAATTGGAAGACATAGCTGAAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTTAATTTGAAGGAGATTCCAGTGGAAAGCAACCAGCCATGGAAAGATCAGCCTACATCTTTGGAAGACAGATATGGTATGTACGGCAGGGATAAAGACAAGGAGGCCATAATGAAGATGGTATTGGAGGATAACACTGATGGTGAAGAAGTGTCCGTGATCCCTATTGTAGGCATGGGTGGGGTTGGGAAAACCACTTTGGCCCGATCTGTGTACAACGATGGAAAATTGAAGCAGATATTTGATTTAAAGACATGGGTTTGTGTTTCTGATATATTTGATACTGTGAAGGTCACAAAAACTATGGTAGAGGAAATTACCAAGAGGCCTTGTAATTTGAATGATCTAAATCTACTTCAACTTGAATTGATGGACAAGCTGAAAGGTAAAAGATTCTTCATTGTTTTGGATGATGTTTGGATTGAGGACTTTGATAGTTGGAATAGTCTTACAAAACCATTTTTAAGTGGGATTAGGGGAAGTAAAGTTCTCGTGACAACCCGCAACGAAAGTGTAGCGGCTGTAGTCCCTTTTAATGTTGTTAAAGTATATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTTGGTGTTTGCAAATCATGCATTTCCTCTCTCAGAAGATAGTGAAAATAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAAAAAGTGTAATGGGTTGCCTTTGGCTGCACAGTCACTTGGAGGAATGTTGAGAAGAAAGCACGCTCTTAGGGATTGGATTAATGTACTTGAAAGTGACATTTGGAAACTTCCTGAAAGTCAGTGTAAAATTATTCCAGCACTCAGAATAAGTTATAATCATCTCCCTCCACATTTAAAACGGTGTTTTGTATATTGCTCACTGTACCCCAAGGATTACGAATTTCGAAAGGACGAACTGATCCTGCTGTGGATGGCCGAAGATCTTTTAAAAGCACCAAGAAAAGAAAAGACTTTAGAAGAAGTTGGTGAGGAGTATTTTGATGATTTGGTTTCAAGATCCTTTTTTCAATGTTCAACTCTTCGGCCTTCGAGTAATTATTTTATAATGCATGACCTCATGCATGATCTAGCAACATTCCTTGGCGGGGAATTCTATTTCAGAGCAAATGAACTTGGAAAAGAAACCAAAATTCATAGAAAGACTCGTCATTTGTCCTTTGCAAGATTCAGTGATCCAGTCTCCGATATTGAAGTTTTTGAGACAGCCAAATTTCCAAGAACTTTCCTGCAGATCCATGATGAAGATTCTCCATTCAACAACGAAAAGGCACCACGTATTATAGTGTCGACGCTTAAGTACTTGAGAGTTTTAAAATTTGGTGACTACCAAAGTAAGCTTGTTCTGCCTGATTCAATCGGTGAATTGATCCATTTGCGTTACTTAAATCTCAATGTTACATCTATAGCAATGCTGCCAGAGTCATTGTGTAATGTGTACAATCTACAAACTTTGAAGTTGGAATCTTGCTTTAATCTGACTGAGTTACCTAGAAACATTCAAAATCTTGTAAACTTACGTCATCTTCGAATTTTTAATACTCCCATAAAAGAAATGCCTAAAAGAATGGGGAAATTAAATCAATTACATGACTTGGATTGTTATGTTGTGGGCGAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCTCCATGGTTCGTTTTCTATTGAGAAATTAGAGAATATTACCAAAGGTGAAGAAGCACTAGAGGCCAGGATAATGGATAAGAAGCACATTACACATTTATCTTTGATATGGTCTGAAGGTAACGATGATATCATCGACTTCCAAATTGAATTAGATGTACTCGGCAAGTTACAACCTCACCAAGATCTGAAATTGCTGAAAATAATCGGTTATAGGGGAACAAGATTTCCAGAATGGGTGGGAAATTTTTCTTATAAAAATATAACTAGTCTGTATTTACATCGTTGTAACAACTGTTGCATGCTTCCTTCACTTGGGCAACTACCGTCTCTCAGTGACCTTGTTATTTCAAACATGAATTCGGTAAAGGCTATTGATGCAGGCTTTTATAAGAAGGATGATTGTTCATCTGTGACGCCCTTTCCATCCCTTGAATATTTACACATTTACGATATGCCTTGTTGGGAGATGTGGAATGCTTTTGATTCAGAAGCTTTTCCTGTGCTCGAAAATCTGTATATAGAAAGGTGCCCCAAACTAAGGGGAGGTTTGCCAGATCATCTTCCTGCTTTGGAAACACTCATCATTAAAAATTGTGAGCTTCTGGTCTCTTCTGTCCCAATGGCTCCCACCCTTCAAAGGTTAACCATAGGTAATAGCAACAAAGTAGCTTTTCGTGAGTTTCCTCTTTTGGTAAAAGATTTAAGGATAGAAGGAAGGACAATGGTAGAGTTCATGATGGAGGCCATCACTAACATCCAACCTACCTGCCTCCAATCTTTAAGTTTGAAGGATTGTTCCACAGCCATATCGTTTCCAGGTGATCGTCTTCCTGCATCGCTGAAAAGTCTGTATATCAGTGGTTTAAACAAGCTGAAATTTCCGGTGCAACACAAACACGAATTACTGGAGTCACTAACAATAATTAATAGTTGTGGTTCCCTGAAGTCTCTCCCACTGATTAACTTTCCAAATCTCATAATTCTTGAAATCAAAGACTGTGAAAATATGGAGTCACTTTTGGTCTTAGAGTCAGAGTCGTTGAAGAGTCTGAATTATTTTGCGATTGAACGTTGCCCCAACTTTGTATCATTCCCGGGAGAAGGATTGTGTATGCCCAATTTGACTTGTCTCATTGTTTATGATTGTGACAAGTTGAAGTCGTTACCCAATCAGATGGAAACTGTGTTCCCAAAGATGGAATATCTTCACATATGCAACTGTCAACAAATTGAGTCATTCCCTGGAGGAGGTATGCCACCTAACTTGAGAACAGTTGATATAAAAAATTGTGTGAAACTACTGAGCAACCAAGCATGGGTATGCATGAACATGGTTACCTCTCTCGAAGTGTGTGGTCCATGTGATGGCATCAAATCCTTCCCAAATGAGAGTTTGCTACCTCCCTCCCTTGTGTCTCTGCATCTACGATATTTGTCTAGTCTGGAAACGTTGGATTGCAAGGGCCTTCTCCATCTCACATCACTCCAAGAATTAAACATTGAAAGGTGTCAAAGGCTGGAGAATATTGCCGGAGAAAAGCTTCCTCTCTCTCTAATAAAATTAAAGATATATAAATGTCCCTTGTTGAAACAACTATGCCACAAAAAGGACCGTCAAATTTGGCCTAAAATCTGCCATGTCCGTGGGATAAACATTGACCATAGATGGGTTTAA 3744 0.3902 MALAVVGGALLSAFLDVLFDRLASPELVSLIRGKKHDKLLQKVENQLIVLRVVLADAENRQITDSNVKKWLDVLRDIVYEVDDLLDEVSTKAATQKEVSNSFSHIFNRKRIVSINKLEDIAERLDDILKQKESLNLKEIPVESNQPWKDQPTSLEDRYGMYGRDKDKEAIMKMVLEDNTDGEEVSVIPIVGMGGVGKTTLARSVYNDGKLKQIFDLKTWVCVSDIFDTVKVTKTMVEEITKRPCNLNDLNLLQLELMDKLKGKRFFIVLDDVWIEDFDSWNSLTKPFLSGIRGSKVLVTTRNESVAAVVPFNVVKVYHLNQLSNEDCWLVFANHAFPLSEDSENRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKHALRDWINVLESDIWKLPESQCKIIPALRISYNHLPPHLKRCFVYCSLYPKDYEFRKDELILLWMAEDLLKAPRKEKTLEEVGEEYFDDLVSRSFFQCSTLRPSSNYFIMHDLMHDLATFLGGEFYFRANELGKETKIHRKTRHLSFARFSDPVSDIEVFETAKFPRTFLQIHDEDSPFNNEKAPRIIVSTLKYLRVLKFGDYQSKLVLPDSIGELIHLRYLNLNVTSIAMLPESLCNVYNLQTLKLESCFNLTELPRNIQNLVNLRHLRIFNTPIKEMPKRMGKLNQLHDLDCYVVGEHKENSIKELGGLPNLHGSFSIEKLENITKGEEALEARIMDKKHITHLSLIWSEGNDDIIDFQIELDVLGKLQPHQDLKLLKIIGYRGTRFPEWVGNFSYKNITSLYLHRCNNCCMLPSLGQLPSLSDLVISNMNSVKAIDAGFYKKDDCSSVTPFPSLEYLHIYDMPCWEMWNAFDSEAFPVLENLYIERCPKLRGGLPDHLPALETLIIKNCELLVSSVPMAPTLQRLTIGNSNKVAFREFPLLVKDLRIEGRTMVEFMMEAITNIQPTCLQSLSLKDCSTAISFPGDRLPASLKSLYISGLNKLKFPVQHKHELLESLTIINSCGSLKSLPLINFPNLIILEIKDCENMESLLVLESESLKSLNYFAIERCPNFVSFPGEGLCMPNLTCLIVYDCDKLKSLPNQMETVFPKMEYLHICNCQQIESFPGGGMPPNLRTVDIKNCVKLLSNQAWVCMNMVTSLEVCGPCDGIKSFPNESLLPPSLVSLHLRYLSSLETLDCKGLLHLTSLQELNIERCQRLENIAGEKLPLSLIKLKIYKCPLLKQLCHKKDRQIWPKICHVRGINIDHRWV 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01009 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 422 IPR027417 -
Vian9g01009 1247 Gene3D Ribonuclease Inhibitor 945 1107 IPR032675 -
Vian9g01009 1247 Gene3D Ribonuclease Inhibitor 1108 1230 IPR032675 -
Vian9g01009 1247 Coils Coil 114 137 - -
Vian9g01009 1247 Gene3D - 148 315 IPR027417 -
Vian9g01009 1247 Gene3D - 11 129 - -
Vian9g01009 1247 Gene3D - 414 495 IPR036388 -
Vian9g01009 1247 FunFam Probable disease resistance protein At1g61300 148 312 - -
Vian9g01009 1247 Pfam Rx N-terminal domain 11 100 IPR041118 -
Vian9g01009 1247 PRINTS Disease resistance protein signature 186 201 - -
Vian9g01009 1247 PRINTS Disease resistance protein signature 1010 1026 - -
Vian9g01009 1247 PRINTS Disease resistance protein signature 259 273 - -
Vian9g01009 1247 PRINTS Disease resistance protein signature 359 373 - -
Vian9g01009 1247 SUPERFAMILY L domain-like 486 904 - -
Vian9g01009 1247 Coils Coil 40 60 - -
Vian9g01009 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 71 903 IPR044974 GO:0006952
Vian9g01009 1247 Gene3D Ribonuclease Inhibitor 553 931 IPR032675 -
Vian9g01009 1247 Gene3D - 321 412 IPR042197 -
Vian9g01009 1247 SUPERFAMILY L domain-like 941 1233 - -
Vian9g01009 1247 Pfam NB-ARC domain 164 409 IPR002182 GO:0043531
Vian9g01009 1247 FunFam Probable disease resistance protein At1g63360 408 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01009 Vian-Chr9 20136242 20139985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01009 156 420 WRKY Transcription Factor Family AT5G45050 24.910 6.01e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01009 - - vun:114165446 1851.25