Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00941 ATGGGGAAAACCACCATGGATGAAGGACGAAACCCAAGGAGGAGAGAGATAGCTTTCCAACACCCCAAACAACCTCTAAGAACCTCTCCTAAGCACCTTAGGCCTACGCACCATCTTAATCTCGTCGTTCTCCGCCACCGCTGCCGGAAGCTTAATTCCACTCTCCGCTGCTCTGCCTCTTCCTTCTCCGAGAAGCACCACACGAACTCCCCCAACTCCGATGACGTCGTCGAACTTCCTCTCTTCACTCTCCCTCTAGTGCTCTTCCTCGGCGCCATCCTCCCCTTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACACTCTTCCAAACAGACCTCCGCTTCGGCGTCATCTACACGGATGTCGTCTCCAGAACTGCAGCCGATGGCTGCGTCAGCAAAGTCATAAAGCATGAGAGCCTCGTGGATGGCCGCTTTTTCCTCATCTGTGACGTGGCTCGAGGATCGGCCATCGAGGTGGAGACCTACATGAAGGACGTTATCCAGTTATGCAACCGGTTGGGTGGGAAACTAGAGAAGGAGGTTGGGGATTTGAGAAGAAACCTGTTTCCAACAACGTTCTCGTTCTTCGTTGGCAACATCTTCGAGGGCGCGCCAAGGGAGCAACAAGCACTGCTTGAATTGGAGGACACCGCCGCCAGATTGAAGAGGGAGAAGGAAACATTGAAGAACACGCTTAATTACCTCACTACTGCTTCTGCTGTTAAAGATTCGTATTTTTATAGAGATTATTGGAAAGACATTGGAACAATAGAATCCTTTTATGATGCTAACTTGGCTCTTACTGAAGAGGCTGCAGTACTGGCTATGGATGATTCAGTGTTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCAACTAGAGAGGAGATAGAGCTTTTAAAGCTTATAGACCGGTTTTGTCTTAAGCAAAGCTTAGCAACTATAACTCTTTTGAGGAAGTTCTTTATTGCAAGCCAAACTTTGATCAACTGTTCAAAAGAACTGGCAGTCTTGACAAAAGCTTCGAAGGTGACCGTGAATGAAACTCCTTATCAAAAGAGTTGTTTCAAATGCATTCATGGAAAACTCTACTGCAAGCACCACCACATGCAATTGATCAAGGAGAAGGAAAATTTCAACCAGCTTGAAGATGACATGAGAAGAGTGCAATTCAACAGAAAATTGAGAAGAAGGGAAATTTAA 1218 0.4647 MGKTTMDEGRNPRRREIAFQHPKQPLRTSPKHLRPTHHLNLVVLRHRCRKLNSTLRCSASSFSEKHHTNSPNSDDVVELPLFTLPLVLFLGAILPLQIFEFRYRIMMHTLFQTDLRFGVIYTDVVSRTAADGCVSKVIKHESLVDGRFFLICDVARGSAIEVETYMKDVIQLCNRLGGKLEKEVGDLRRNLFPTTFSFFVGNIFEGAPREQQALLELEDTAARLKREKETLKNTLNYLTTASAVKDSYFYRDYWKDIGTIESFYDANLALTEEAAVLAMDDSVLDVDQVENLIKFCPTREEIELLKLIDRFCLKQSLATITLLRKFFIASQTLINCSKELAVLTKASKVTVNETPYQKSCFKCIHGKLYCKHHHMQLIKEKENFNQLEDDMRRVQFNRKLRRREI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00941 405 MobiDBLite consensus disorder prediction 1 20 - -
Vian9g00941 405 Coils Coil 207 241 - -
Vian9g00941 405 SUPERFAMILY Formin homology 2 domain (FH2 domain) 275 310 - -
Vian9g00941 405 SMART lon_5 78 233 IPR003111 -
Vian9g00941 405 SUPERFAMILY PUA domain-like 78 232 IPR015947 -
Vian9g00941 405 Gene3D - 76 169 IPR046336 -
Vian9g00941 405 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 39 154 - -
Vian9g00941 405 Pfam Nucleotidyl transferase 215 272 IPR005835 GO:0009058
Vian9g00941 405 Gene3D - 265 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00941 Vian-Chr9 17943755 17953293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00941 274 306 FH2 protein (formin) Gene Family AT5G07740 87.879 9.89e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00941 - - gmx:100807718 320.857