Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00876 ATGGAGTATCTCTCCTTTCAGCAGAAATGTCTTGCGGCTCTCTGCAACGCCACGCTGCAAGACCTCACCTTCAAGTACCAACTCCCTGGCGAAGACCTCGATGCCCTAATCTCCGTTACCAACGACGACGACCTAGAACACATGATGCACGAGTACGACCATCTCTATTGCCCTTCCAAAACTGTTAGGATGAGACTCTTTCTCTTCACGCTTTCGTTAAACCCTAATTCCCCGTTCTCCTCGGATCGTGATCGCTTCGTTGATGCTCTTAACTTTGCTCCAATTCCTTCACAACCTAACGCCATCAAAACCCCTCCCGTTACTCCTTCTAATGTCAATTACCTCTTCGGTCTCGACAAGGCCGTTGCTCGTCCCACTCTCCCTCCTACCTTTGCGACCGTCAATCCAAGTGGAGGTTTCACATGCTAA 429 0.4988 MEYLSFQQKCLAALCNATLQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDHLYCPSKTVRMRLFLFTLSLNPNSPFSSDRDRFVDALNFAPIPSQPNAIKTPPVTPSNVNYLFGLDKAVARPTLPPTFATVNPSGGFTC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00876 142 SMART PB1_new 1 69 IPR000270 GO:0005515
Vian9g00876 142 Pfam PB1 domain 18 69 IPR000270 GO:0005515
Vian9g00876 142 Gene3D - 2 70 - -
Vian9g00876 142 PANTHER OS05G0427100 PROTEIN-RELATED 9 122 - -
Vian9g00876 142 SUPERFAMILY CAD & PB1 domains 19 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00876 Vian-Chr9 15052120 15053509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00876 24 91 MAP Kinase Kinase Kinase AT5G57610 48.000 2.16e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00876 - - gmx:100810467 199.904