Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00852 ATGGCAAACTGTATTTACAGCTTATTGCTTATAGCCTTCTATATGATGGGTGAGGTATCATCTGTCATTGGTGGCTCCATGCCTTCTTCTTCCATCAATCATGAACGACAGGCTTTGCTCCACAGCGGTTGGTGGAATGATGACAGTAATATCTCTGACCATTGTGATTGGGAGGGTATCTCTTGCAATGAAGCTGGAAGTATTACTGCTATTGAAAGATGGAAGATTCCTTCATCAAAAGAATTGCTTTGGATTGAGAAGTTCAACGTCACTGCCTTCCCCAACTTAGTCTATCTGCGTCTATATGGAATGGGTCTTAGAGGAACCATCCCTAAAGAAATAGGCTCACTTACAAACCTTACCACCCTTGTCCTCACCAACAATCATCTCCAAGGTTCAATACCACCACAACTTGGAAACTTGACACAATTGAAGATGTTATCTCTCTCTCAGAATTCTTTATCAGGTTTAATTCCATGTACACTTGGTCAACTCATCAATTTGCAATTTCTCTATCTTGAATCAAACAAACTTGAAGGTCAATTGGAGAATTTGGTACATCTCTACCTTAATTATAATGAAATAGAAGGTCAGATACCTGAAGAATTAGGAAATTTGTCCAAGTTGGAAATTTTGCAACTTTCTCATAATAGGATTTCAGGTTTACTACCTCCAAAACTCTTGCAAATGGACAAAGTGTTCTGTTTACATCTCTCGTCAAATCAGTTATATGGTTCAATACCATTAGAAACTATGAAATGTCCCCATACTGTTGATTTAAGCTTCAACTTCTTTAATGGAAGCATAACCTCTCGAATTGGTTGTGTGAGTGACCTCAATCTTAGTCACAATTTCCTTGTTGGTGAGATTTCACCTCTTTTGAAAATGAGTTTTGTTCTTAGTCGATTGGATCTTAGCTATAATAATCTTTCGGGTAAAGTACACAAGGAACTTGCTAGTCTATCATATATAAACCTTTCATACAATTCCTTTGACTTTTCACAAGACCTTGACTCAAAATTGGAGGTACCAGATTACTGTTTTTTTCAGGAAGACTCATTAATTGATGATCACCACATGCCCAATTTTACATACTGCAACGTGCTCAATGAGACAAATCCTCAAAGTAGAAAAAATAAGCCCATCATTGTGTTAATTGTTCTTCCAGTCATTTTCTTCAGTGTTGTAATACTCCTTCTAATATTATATTTCTCAAGATGTATTCCTAAGAAAAAATGTGAAGGAATATCAACAAAGAATGGAGACTTGTTTTCTATATGGAACTATGATGGTAAAATTGCATTTGAGGATATCATTGAAGCAACCGAAGACTTTGACCTTAAGTATTGCATTGGGACAGGCGCATATGGTTGTGTTTATAGAGCACAACTACCCAGCGGCAATATTGTTGCATTAAAAAAACTCCATTGTGTGGAATCCCAAAATCCATCTTTTGACAAAAGTTTCCGTAATGAGGTGAAGATGTTAACAAAAATCCATCATAAAAATATTGTAAAGCTTCATGGTTTTTGCCTCCACAATCGGTGTAAGTTTTTGGTCTATCAATACATGGAAAGAGGTAGTTTATTTTATACTTTGAGTAATGAAGTGGAAGCTAAGGAGTTGAATTGGAGTAAGAGGGTGAATGTTATTAAAGGAATGGCAGAGGCTTTATCCTACATGCATCATGATTGTAGCCCACCAATTGTTCATCGAGATGTAACAAGTAGCAATGTTCTGTTAAACTCAAAATTAGGGGCTTATATCTCAGACTTTGGCACAGCTAGACTCCTTCAACCTGATACATCAAATCAAACCTTGGTAGTTGGCACTCGTGGCTACATTGCTCCAGAGCTTGCTTATACATTAAGCGTGACAAAAAAATGCGATGTTTATAGTTTTGGAGTGGTGACTTTGGAAACATTAATGGGAAAACATCCTGGAGATCTAATCTTGTCATTATCAAACCCAAGAACTGAAAATATGTTCGTGAAAGATCTTTTGGATTCACGTCTTCCTCTGCCTCTCTGGAGAGAAGCTCAAGATATCATTCTCGTGATAACACTAGCATTATCATGTTTGTGCTCCAAACCAAACTTAAGACCATCAATGCAACAAGTGGCTGAGAAACTCTCAAGTTTCAAACTAGTATTATCTTTGTCTTTTCATGAAATTTTGATTCGTGAATTAATGAGTCAAGACATATTTCATCTTTCTTTGAAGTGTCAAGGATGA 2235 0.3664 MANCIYSLLLIAFYMMGEVSSVIGGSMPSSSINHERQALLHSGWWNDDSNISDHCDWEGISCNEAGSITAIERWKIPSSKELLWIEKFNVTAFPNLVYLRLYGMGLRGTIPKEIGSLTNLTTLVLTNNHLQGSIPPQLGNLTQLKMLSLSQNSLSGLIPCTLGQLINLQFLYLESNKLEGQLENLVHLYLNYNEIEGQIPEELGNLSKLEILQLSHNRISGLLPPKLLQMDKVFCLHLSSNQLYGSIPLETMKCPHTVDLSFNFFNGSITSRIGCVSDLNLSHNFLVGEISPLLKMSFVLSRLDLSYNNLSGKVHKELASLSYINLSYNSFDFSQDLDSKLEVPDYCFFQEDSLIDDHHMPNFTYCNVLNETNPQSRKNKPIIVLIVLPVIFFSVVILLLILYFSRCIPKKKCEGISTKNGDLFSIWNYDGKIAFEDIIEATEDFDLKYCIGTGAYGCVYRAQLPSGNIVALKKLHCVESQNPSFDKSFRNEVKMLTKIHHKNIVKLHGFCLHNRCKFLVYQYMERGSLFYTLSNEVEAKELNWSKRVNVIKGMAEALSYMHHDCSPPIVHRDVTSSNVLLNSKLGAYISDFGTARLLQPDTSNQTLVVGTRGYIAPELAYTLSVTKKCDVYSFGVVTLETLMGKHPGDLILSLSNPRTENMFVKDLLDSRLPLPLWREAQDIILVITLALSCLCSKPNLRPSMQQVAEKLSSFKLVLSLSFHEILIRELMSQDIFHLSLKCQG 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00852 744 Pfam Protein kinase domain 450 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00852 744 Gene3D Transferase(Phosphotransferase) domain 1 524 720 - -
Vian9g00852 744 ProSitePatterns Protein kinases ATP-binding region signature. 451 473 IPR017441 GO:0005524
Vian9g00852 744 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Vian9g00852 744 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Vian9g00852 744 Gene3D Ribonuclease Inhibitor 182 274 IPR032675 -
Vian9g00852 744 Gene3D Phosphorylase Kinase; domain 1 411 523 - -
Vian9g00852 744 FunFam Nuclear pore complex protein NUP107 28 181 - -
Vian9g00852 744 SUPERFAMILY L domain-like 44 332 - -
Vian9g00852 744 SMART LRR_typ_2 182 205 IPR003591 -
Vian9g00852 744 SMART LRR_typ_2 141 164 IPR003591 -
Vian9g00852 744 SMART LRR_typ_2 206 230 IPR003591 -
Vian9g00852 744 SMART LRR_typ_2 117 140 IPR003591 -
Vian9g00852 744 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 91 181 - -
Vian9g00852 744 FunFam MDIS1-interacting receptor like kinase 2 524 716 - -
Vian9g00852 744 FunFam Leucine-rich repeat receptor protein kinase MSP1 409 523 - -
Vian9g00852 744 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Vian9g00852 744 Pfam Leucine rich repeat 184 243 IPR001611 GO:0005515
Vian9g00852 744 ProSiteProfiles Protein kinase domain profile. 445 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00852 744 Gene3D Ribonuclease Inhibitor 275 343 IPR032675 -
Vian9g00852 744 PRINTS Leucine-rich repeat signature 206 219 - -
Vian9g00852 744 PRINTS Leucine-rich repeat signature 144 157 - -
Vian9g00852 744 SUPERFAMILY Protein kinase-like (PK-like) 431 711 IPR011009 -
Vian9g00852 744 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
Vian9g00852 744 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 269 - -
Vian9g00852 744 ProSitePatterns Tyrosine protein kinases specific active-site signature. 569 581 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00852 Vian-Chr9 13658490 13661167 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00852 86 617 Receptor kinase-like Gene Family AT4G08850 37.798 8.25e-107 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vian9g00852 Pkinase 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00852 - - vum:124829098 1117.06