Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00841 ATGCAAGCCAAGATGTTGAAGGTATTAGTGACAGTAGTAATTGTAGGGTTGATGATTACGAAGATGGCGCAAAGTGAAAGAGAAGTTGATGGGATTTTGGGTTCAAAGAAAACAGTTCGTGTTGAAAATGATTTGACAAATGGAATTTCTGTGTTTCTCCATTGCAAATCGAGGGATGATGATCTTGGAGAACATGTTCTTGAGAATGGACAGTATCAAGAATGGCGTTTCAGAAATAACATTGCTCACAGCACTCTTTTCTGGTGTGCCATGCGAGCATCCAATGTTCAAAGCAGTTTTGATGTTTATAGTTACAAAGCTGACAATGCTGTGTGTGACCAATGTAACAGAAGTTTGAGAAATGATGGATTGTATTTCTATAATCAGTTCGAAAACAAATGGGAGAAGAAACTCTCATGGAATATCCAAGCTTTCTGA 438 0.379 MQAKMLKVLVTVVIVGLMITKMAQSEREVDGILGSKKTVRVENDLTNGISVFLHCKSRDDDLGEHVLENGQYQEWRFRNNIAHSTLFWCAMRASNVQSSFDVYSYKADNAVCDQCNRSLRNDGLYFYNQFENKWEKKLSWNIQAF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00841 145 PANTHER - 35 133 IPR010264 -
Vian9g00841 145 Pfam Plant self-incompatibility protein S1 38 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00841 Vian-Chr9 13044355 13044792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00841 21 144 Carbohydrate Esterase AT3G16970 28.125 2.42e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00841 - - pvu:PHAVU_010G083600g 225.328