Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00814 ATGGGAGAAAACCCGGAACGACAATGGTGCCTCAGTGACTTCGAAATCGGAAAGCCTCTTGGAAAAGGCAAATTCGGCAGAGTCTACGTCGCCCGAGAACGCAAGAGCAAATTTGTTGTTGCATTGAAGGTTATTTCGAAGGAGCAATTAGAGAAGTACAAAATCCATCATCAACTGAGGAGGGAGATGGAGATTCAGTACAGTCTGAAGCATCCGAACGTACTTCGTCTGTATGGCTGGTTTCATGACTCCGAGAACGTCTTTTTAATTCTGGAATATGCTCACAATGGTGAGCTTTACAAGGAGCTTAGCAGAAAAGGGCATTTCAGCGAGCAACAAGCTGCCACGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCGGTACAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTTTAGGTATCCTTTGCTATGAATTCCTTTATGGTGCTCCGCCATTTGAGGCTGATAGTCAAGTTGATACCTTCAAAAGGATAATGAAGGTTGACTTAAGTTTCCCCTCTACTCCTTATGTTTCTTCAGAAGCCAAACATCTTATTAGTCGGCTTCTGGTAAAAGACTCTTCACGAAGGCTCTCTCTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATAGGGATTGCAGCAGAATTTGACATGCTGATATTGCAATGCGATCACATATCTCTGTTTGTCAGAGTTGATGTCTGTTACCAACTTGAACGATACTGTCCATTTCTATGGGGATTTGGAAGAGCACATGGCATTCTATATGTGGTTGAAAAGACAAGGATTGAACTGCACATGGCGAGCGCTGTAGATGCCTCGGGAAACCCTATCCCTTCGTCGTCGGTGTTGATGGCATCGTCGAAGCACATTGGGATTCGGTGTCACTCTGAGAACTTGGAGTTTCTGAAGTGCAAGAAGAAAGATCCCAACCCTGAAAAGTGTCTTCACAAGGGTCGAGAAGTTACTCGTTGTGTCCTTGGACTGTGA 1080 0.4417 MGENPERQWCLSDFEIGKPLGKGKFGRVYVARERKSKFVVALKVISKEQLEKYKIHHQLRREMEIQYSLKHPNVLRLYGWFHDSENVFLILEYAHNGELYKELSRKGHFSEQQAATGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEADSQVDTFKRIMKVDLSFPSTPYVSSEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANPIGIAAEFDMLILQCDHISLFVRVDVCYQLERYCPFLWGFGRAHGILYVVEKTRIELHMASAVDASGNPIPSSSVLMASSKHIGIRCHSENLEFLKCKKKDPNPEKCLHKGREVTRCVLGL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00814 359 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 322 359 - -
Vian9g00814 359 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 116 238 IPR030616 GO:0004672
Vian9g00814 359 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vian9g00814 359 ProSiteProfiles Protein kinase domain profile. 14 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00814 359 Pfam Protein kinase domain 14 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00814 359 Pfam Protein kinase domain 116 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00814 359 CDD STKc_Aurora 13 233 - -
Vian9g00814 359 Gene3D Phosphorylase Kinase; domain 1 3 97 - -
Vian9g00814 359 Gene3D Transferase(Phosphotransferase) domain 1 114 255 - -
Vian9g00814 359 SUPERFAMILY Protein kinase-like (PK-like) 7 242 IPR011009 -
Vian9g00814 359 FunFam Aurora kinase A 6 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00814 Vian-Chr9 11949843 11964577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00814 6 239 CBL-interacting serine-threonine protein kinases AT5G10930 33.333 1.25e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vian9g00814 Pkinase 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00814 K08850 - gmx:100775802 432.18