Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00813 ATGGATCTTTTGTATACCCTATTGAGTTTCATAGCTTTTTCTCTTCTGGGTATCTTCCTAGTCTTCTGTTTCATCATGTTGACCACGATTCTGGGAAAATCCATTGGAGACCCTGATTATGCTCCAGTGAAAGGAACAGTGTTTAACCAGCTTTTCTACTTCAACACACTCCATGACTACCAAGCTGAAATGGCCAAGACGATTCCAACTTTTCGTCTACTGGCTCCTGATCAAAGCGAGGTGTACACTGCAGACCCGAGAAATGTTGAACACATACTGAAAACCAACTTTGATAAGTACTCCAAAGGCAAGTATAACCAGGATATTGTGACTGATCTTTTTGGTGAGGGGATTTTTGCAGTTGATGGTGACAAGTGGAGGCAGCAAAGGAAGCTTGCAAGCTATGAATTCTCCACAAGGGTTCTTAGAGATTTCAGTTGTTCTGTTTTTAGAAGAAATGCTGCCAAGTTGGTCAGAATTATCTCAGAACTTTCCCATCAGGGTCAAGTTTTTGATATGCAAGCTCGATGGCCTACTAAACTGGTACATGGTTGGGTGACCTATTTGTTGACCAACCGAGTTCGGTGTCTTGTTAATCGAGTTGGTACATGGCTGGTCAGCCGAAATGGTGATTGGGTTGACATGCTAATGAGATGCACTTTGGACTCAATATTCAAAGTTGGGTTTGGAGCAGAATTGAATTGCTTGGAGGGATCAAGAAAAGAGGGAAGCAAATTCATGAAAGCCTTTGATGAATCAAATGCTTTGATATATTGGCGCTATGTTGATCCTTTCTGGAAGCTCAAGAGGTTTCTTAACATTGGTTGTGAAGCTACACTTAAGAGAAACATCAGAATAATAGATGGTTTTGTGCATGAAGTAATCAATACCAGAAAAGCACAATTGGCAATTCAGCAAGAATCTAATGCTAAAGAGGACATACTATCAAGGTTTTTGATTGAGAGCAAGAAGGACAAAGAAACCATGACTGATCAGTATTTGAGAGACATCATTCTAAACTTTATGGTAGCTGGTAAAGACACAAGTGCAAACACTCTTTCATGGTTCTTCTACATGCTCTGCAAGAACCCTCTTGTTGAGGAAAAGATTGTACAAGAAGTGAGAGATGTGATTTGTAGCCATGAAAATGAGGAAAGCATAGATAAATTTGTGGCCAAAATAACAGATGACACCCTTGATAAAATGCATTATCTTCATTCAGCGTTGACAGAAACCTTGAGACTTTATCCTGCAGTTCCTGTGGATGGGAGAGTGGCAGAGACAGATGATGTTCTTCCTGATGGACACAAACTGAAAAGGGGTGATGGAGTTTACTATATGGCCTATGGTATGGGTCGGATGTGCTCCATTTGGGGTGAAGATGCAGAGGAATTTCGTCCTGAAAGATGGCTCAACAATGGAGTTTTCGAGTCTCAATCTCCATTCAAATTCATAGCTTTCAATGCTGGTCCAAGAATCTGCTTAGGGAAGGACTTTGCTTACAGACAGATGAAAATAATAGCAATGGCTCTTGTTCATTTCTTCAAGTTCAAACTTGCAAATGGAACACAAAATGTGACTTACAAGGTTATGCTTACGCTTCACATTGACAAGGGTCTTCCTCTTTGTGCAATTCCAAGGTCATGA 1647 0.4056 MDLLYTLLSFIAFSLLGIFLVFCFIMLTTILGKSIGDPDYAPVKGTVFNQLFYFNTLHDYQAEMAKTIPTFRLLAPDQSEVYTADPRNVEHILKTNFDKYSKGKYNQDIVTDLFGEGIFAVDGDKWRQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVRIISELSHQGQVFDMQARWPTKLVHGWVTYLLTNRVRCLVNRVGTWLVSRNGDWVDMLMRCTLDSIFKVGFGAELNCLEGSRKEGSKFMKAFDESNALIYWRYVDPFWKLKRFLNIGCEATLKRNIRIIDGFVHEVINTRKAQLAIQQESNAKEDILSRFLIESKKDKETMTDQYLRDIILNFMVAGKDTSANTLSWFFYMLCKNPLVEEKIVQEVRDVICSHENEESIDKFVAKITDDTLDKMHYLHSALTETLRLYPAVPVDGRVAETDDVLPDGHKLKRGDGVYYMAYGMGRMCSIWGEDAEEFRPERWLNNGVFESQSPFKFIAFNAGPRICLGKDFAYRQMKIIAMALVHFFKFKLANGTQNVTYKVMLTLHIDKGLPLCAIPRS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00813 548 CDD CYP86A 69 540 - -
Vian9g00813 548 Gene3D Cytochrome P450 34 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 SUPERFAMILY Cytochrome P450 49 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS E-class P450 group I signature 406 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Vian9g00813 548 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 PANTHER CYTOCHROME P450 25 540 - -
Vian9g00813 548 Pfam Cytochrome P450 48 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00813 548 Pfam Cytochrome P450 208 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00813 Vian-Chr9 11945085 11949213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00813 7 548 Cytochrome P450 AT2G45510 58.791 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00813 - - gmx:100792128 916.761