Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00802 ATGGAGTACCTTCTTCAACTTCTTCAAATCACCATAGTGTGTGTAACCATTCATTTACTCATCTCAACCTTCAAACCAATGAAAACCTCAAAGTACCCTCCAGGGCCTCACCCTTTTCCCATCATAGGAAATATCTTGGAGCTTGGAAACCTGCCACACCAAGCACTTGCCAAGCTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCATTACCACCATAGTCATTTCCTCTCCACATGTTGCCAAAGAAGTACTGCAAAAACATGATCAAATCTTTTCCAGCAGAAAAATCCCAGATACTCTTCGAGCTCTTGATCATCACATACTTTCAATGGCATGGATGCCACCTTCAGCACTGTGGAGGACCCTTAGGAGAGCGTGTGCCACCAAAGTGTTCTCTTCTCGGCAGCTTGATTCCACACAAGTTGGTCGAGAGAGGAAGGTGCAAGAATTGATGGATTATGTCAAGGAAAGATGTCAGAAAGGTGAAGCCTTAGATATTGGTGAGGCTTCCTTCACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTAGCTCATTACGCTTCTGACAAATCTCAAGAGTTCAAGGACATCATTTGGGGCATCATGGAAGAAGCTGGAAGGCCTAATGTTGTTGACTTTTTTCCAATCTTTCGCATGCTTGATCCACAGGGTACTCGGAGAAGAATGAATGGTTACTTTGAAAAGTTAATAGCGTTTTTTGATGGACTAATAGAAGAAAGATTGCGTTTAAGGGCATTAGAAAATGAAGCCAAGGCATGCAAGGACGTGTTGGATTCTGTGTTGGAACTCATGCTTGAAGACAATTCACAAGTGACTCGCCCTCATGTTCTGCATTTGTTTCTGGATTTATTTGTGGCTGGAGTAGACACAACATCAAGCTCTATACAATGGGCTATGGCTGAGTTGCTACGTAACCCAGAAAAGCTAGAAAAAGTGAGGGAAGAGCTTCACCAAGTCCTTGTCAAAGGTGAGCAACTAGAAGAATCACATATCTCAAAGCTTCCTTACCTACAAGCAGTGGTGAAGGAAACTTTCCGCTTGCATCCACCTGTTCCAATGTTAGTGCCACACAAGCCAGAAGTTGATGTTGAACTATGTGACTTCATGGTACCTAAAAGTTCCCAAATTTTCATTAATGTATGGGGCATGGGTAGAGATTCAAATATTTGGACAAACCCAGATGAATTCAAACCTGAAAGATTCTTGGAAAGTGACCTTGATTTTAAAGGCCAAGATTTTGAACTAATACCCTTTGGAGCAGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTCCAGAACTGTGCATATTGTATTGGCCTCTCTTCTATGTAAGTATAATTGGAAGCTCAAAGATGGACAAAAGCCACAAGACATGGATATATCTGAGAAATATGGGATTACGTTGCATAAGGCACAACCTCTCCTAGTCATTCCAATCCAAGCATGA 1497 0.4175 MEYLLQLLQITIVCVTIHLLISTFKPMKTSKYPPGPHPFPIIGNILELGNLPHQALAKLSQIYGPIMSLKLGSITTIVISSPHVAKEVLQKHDQIFSSRKIPDTLRALDHHILSMAWMPPSALWRTLRRACATKVFSSRQLDSTQVGRERKVQELMDYVKERCQKGEALDIGEASFTTVLNSISNTFFSMDLAHYASDKSQEFKDIIWGIMEEAGRPNVVDFFPIFRMLDPQGTRRRMNGYFEKLIAFFDGLIEERLRLRALENEAKACKDVLDSVLELMLEDNSQVTRPHVLHLFLDLFVAGVDTTSSSIQWAMAELLRNPEKLEKVREELHQVLVKGEQLEESHISKLPYLQAVVKETFRLHPPVPMLVPHKPEVDVELCDFMVPKSSQIFINVWGMGRDSNIWTNPDEFKPERFLESDLDFKGQDFELIPFGAGRRICPGLPLASRTVHIVLASLLCKYNWKLKDGQKPQDMDISEKYGITLHKAQPLLVIPIQA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00802 498 FunFam Cytochrome P450 76C4 25 494 - -
Vian9g00802 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 497 - -
Vian9g00802 498 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vian9g00802 498 CDD CYP76-like 60 495 - -
Vian9g00802 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00802 498 Coils Coil 325 345 - -
Vian9g00802 498 Coils Coil 252 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00802 Vian-Chr9 11415535 11417104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00802 28 497 Cytochrome P450 AT2G45550 49.683 2.96e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00802 - - gmx:100809483 865.529