Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00793 ATGAACAATGAAATGACTTGCGCAGGAAAGAGGAGTAAGGCAGAGTTCTGTTGCATTTCTCACGAATTCTTTCGAACAGCGTACGCAAACCCTAACAAAATCGCAGTGATTCATGCTACCGGCGGGGCGCACCTTAGCCGGGAGTTTCGCCGGGAGAATTCCACCACCACGGACTTCAACGGCGACATTGCCGCCCTCTTAGAGAAGCACGTCGAGTCCATATCTCCGCCATTTTACGACGGGGACCGGTGCTTCACTTACTCTCATGTCTTGGATGCGGTTCGTTCCCTCAGCTCACGCCTCCGCTCTATCCTGCTTGGTGCGGATGACCCACACTTGATCACTGCACAATCTCCAGCATTGAGTGAAATTGCCGTGAATTTTTCTTGTGCTGTTTGGTTCGATGAAATTGAAGGGAGAAATTGTGAAAATTATGAAAATGTTTATAAAAGTGAACAACGCACCAACATTACGTTGCTTGGAGTAGAACTGGACTCGAATTTCTTATTCAAGATTTTACATATGCCTGAATGTGGAAAAGTTTGTGTGTATGAATGCGGAAAAGTTTGTGTTTGCATCCTGTATTCTGCTGCAGGTAGCAATGGTGTCAACTGTGAAAAGAGAACTGTACAGAAACCTGAGTCCTTGGAAACTGTCATGCCCAGTGAAGAGGCGATAGCTGAATCAAGTGAAGAGTATAGGCCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTTGAATATATCGTAGCTGTTCTTTCGGTACTTTGGTGTGGGGCAGCCTTCCTGCCTCTAGATCCTTTTTGGCCAAATGAAAGGATATTGTTTGTTGCCTCTTCTTCAAACGTTGATCTCATTATAGGATCCCAATATTCTTTTGGTAAAAGAAATTTGGAGAAGCTTGATGAATCACATTGGCTGGTAAAGTCAAGTAGTTGTCCAGTTTTGAATTACTCCATTGACCAAAAACTACAGGATTGTAGTGGTCCAACAGATTTGGCATGGCCATGTGTTAATGGAAAACAAAGATCATTCTGCTATGTGATGTACACATCTGGATCAACTGGAAAACCTAAGGGAGTGTGTGGCACTGAACAAGGTCTTTCTAATCGTTTTTCATGGATGCAAAGAATGTATCCTCTGAATGGACAGGAACTGTTGTTGTTTAAGTCATCAGTTAGCTTCATTGATCACCTGCAAGAATTTCTCAGTGCTATTTTGACTGCTTGTGTGTTAGTTATTCCTCCTTTCAACGAGCTAAAAGAAAATGTGTATTCTATGATAGATTTCCTGCAGGCATATTTTGTTAATAGGCTCACAGCCGTTCCATCACTAATGAAGACTATTCTTCCGGGATTGAAAACCAATGCTAACATGCGAGTTGAAAATTCATTGAAATTGCTTGTGCTCAGCGGTGAAACTTTTTCTTTGACCTTGTGGGAGATGCTTTCAACTATATTACCGAAGACATCAATCTTGAATTTATATGGAAGCACTGAGGTCTCTGGTGACTGTACATATTTTGATTGCAAGAGAATGCCATTGATTTTTAAGGAAGAAAGGCTAACCAGTGTTCCAATAGGTTTACCCATTCCTAACTGTGATGTGATTCTTCTTAGTGAAAATGATGCATCAAATGAGGGAGAGCTATATGTTGGTGGTCATTGCATCTTTAGGGGTTACTACAAGGAATCTAAGGAAATGTCATTTGCAAAATTGCTTCCACATTACAGTTGTGGTGATTTTGTTAAAGGATGCCAAGATAAATTATACTTTAGAACAGGTGATTTAGTCAAACAGTTGCCTAGTGGTGATTTTGTATTTTTGGGAAGAAAAGATCGCATTATAAAAATCAATGGACAGCGTATTGCCCTAGAAGAGGTTGAAGATTTGTTAAGGGAGCATCCACATATAAACGATGCTGCTGTAGTTTGTCGAAATAATAAAGCAGAACTTGTGCTTGTTGAAGCCTTTATCATACTGAAGAAAAAAGAAAGCTTGGGTGAATCATTAATTCCTGCAATCAGAAGTTGGATGATTAACAAACTTCCTTCTGTTGTACTTCCCAACCGTTACTTCTTTATAGAATCATTCCCCCTGTCTCCTAGTGGTAAGGTTAATTATGAATTGTTGTTTGGCTCAGAATTATTGACAAAGAATGTCAAAGATAAAGTTGGTGACATTGACTGCAGCAATCTTTTGCAACTTATTAAAAAGGCATTTCATGATGCTTTGATGATTGAAAAGGTTTGTGATGATGATGATTTCTTTATGATGGGCGATTGGACTCAGGTGGGAGCAGCTTTTATTACGACTATGGGAGCAGCTGTCCTTGCGGCCTTGATGTTCTTCACAATGGTGCCTCTTGTGCCATTTCTTGCTTGTGACCTCGGGATGACACCTCTTGCGGACTTACAATGTGGTTCTGTCCAGTGGGAGATCAAACTGGAAGGGCGAATTGAAAGTACAGCAGCAATTGTTTCTGATTTTTCCCAGGCTTCTCCTTTTACTATTTTGTGGCTAAATGAATTAGAAGGTCCTGTGTTTGGTTCTCTTGCAGTCGCCCACAATGGAACTGTGATATGTTGCTTGGTAGATGGTCATGTTCTTGCATTGAGTCCAAATGGATCCGTTGTTTGGAAGGAGGAGGGGGACCTACTATGGGAATACAATGTTGGACATCCAATTACAGCATCTGCTTATGTTGACGAGCACTTGCTGGTGGAGTCTGATGCTTCCAATTCCTCAGACAGGCTAATTTGCATTTGTTCCAGTTCTGGAGGCATACACCTTCTTCGAGTGAATATGAATCTCTCCAAAGATACTTATCAACAAAGAAATGTGCAAGAATTTGCAAGGCTAAACTTGGCAGGGGATATATTCTCTTCACCTTTAATGATTGGTGGTCGGATTTTTGTTGGTTGTCGGGATGACTACTTGCATTGTATTGCCCTTGAAATTTCAAAACAACAAGAAACTTAA 2982 0.4091 MNNEMTCAGKRSKAEFCCISHEFFRTAYANPNKIAVIHATGGAHLSREFRRENSTTTDFNGDIAALLEKHVESISPPFYDGDRCFTYSHVLDAVRSLSSRLRSILLGADDPHLITAQSPALSEIAVNFSCAVWFDEIEGRNCENYENVYKSEQRTNITLLGVELDSNFLFKILHMPECGKVCVYECGKVCVCILYSAAGSNGVNCEKRTVQKPESLETVMPSEEAIAESSEEYRPKIVGIYMPPSVEYIVAVLSVLWCGAAFLPLDPFWPNERILFVASSSNVDLIIGSQYSFGKRNLEKLDESHWLVKSSSCPVLNYSIDQKLQDCSGPTDLAWPCVNGKQRSFCYVMYTSGSTGKPKGVCGTEQGLSNRFSWMQRMYPLNGQELLLFKSSVSFIDHLQEFLSAILTACVLVIPPFNELKENVYSMIDFLQAYFVNRLTAVPSLMKTILPGLKTNANMRVENSLKLLVLSGETFSLTLWEMLSTILPKTSILNLYGSTEVSGDCTYFDCKRMPLIFKEERLTSVPIGLPIPNCDVILLSENDASNEGELYVGGHCIFRGYYKESKEMSFAKLLPHYSCGDFVKGCQDKLYFRTGDLVKQLPSGDFVFLGRKDRIIKINGQRIALEEVEDLLREHPHINDAAVVCRNNKAELVLVEAFIILKKKESLGESLIPAIRSWMINKLPSVVLPNRYFFIESFPLSPSGKVNYELLFGSELLTKNVKDKVGDIDCSNLLQLIKKAFHDALMIEKVCDDDDFFMMGDWTQVGAAFITTMGAAVLAALMFFTMVPLVPFLACDLGMTPLADLQCGSVQWEIKLEGRIESTAAIVSDFSQASPFTILWLNELEGPVFGSLAVAHNGTVICCLVDGHVLALSPNGSVVWKEEGDLLWEYNVGHPITASAYVDEHLLVESDASNSSDRLICICSSSGGIHLLRVNMNLSKDTYQQRNVQEFARLNLAGDIFSSPLMIGGRIFVGCRDDYLHCIALEISKQQET 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00793 993 Gene3D - 798 986 IPR015943 GO:0005515
Vian9g00793 993 SUPERFAMILY Acetyl-CoA synthetase-like 236 711 - -
Vian9g00793 993 ProSitePatterns Putative AMP-binding domain signature. 348 359 IPR020845 -
Vian9g00793 993 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 838 984 IPR011047 -
Vian9g00793 993 Gene3D - 613 715 IPR045851 -
Vian9g00793 993 ProSiteProfiles Ig-like domain profile. 847 939 IPR007110 -
Vian9g00793 993 CDD A_NRPS 234 711 - -
Vian9g00793 993 FunFam Putative acyl-activating enzyme 19 200 612 - -
Vian9g00793 993 Pfam AMP-binding enzyme C-terminal domain 627 705 IPR025110 -
Vian9g00793 993 Gene3D - 204 612 IPR042099 -
Vian9g00793 993 Pfam AMP-binding enzyme 237 618 IPR000873 -
Vian9g00793 993 PANTHER BETA-ALANINE-ACTIVATING ENZYME 882 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00793 Vian-Chr9 11096242 11133612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00793 341 725 Monolignol Biosynthesis Gene Families AT4G19010 24.566 9.62e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00793 K00142 - gmx:100820175 932.554