Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00790 ATGCCATCGCGTCCGCCGCCACCCTCGCCTCACGCGGCGGTTTCCGCCATCTCGCACCGTCGAGAGATGATTCTCTGCGGGGTAATCGGCGGGGCGCTCTTCTTAACGGCGCTTATTGTCTCTGTCACGGTCTTTCTCTACCGGAAACTTTCTTACAACCGAACGGCGCCGTTTGAGCACAACCAGCGACGTTTCTCTTACTCTGTTCTACGCCGCGCGACGAACTCGTTCTCGCCGTCGACGAAGCTCGGGCACGGCGGGTTCGGTTCGGTTCACAAAGCGACTCTGCCTTCCGGCCAGACTGTGGCGTTGAAGGTTATGGACTCGCCTGGGTCAATCCAGGGGGAGAGAGAGTTCCACAACGAGTTGACGTTGTGTTCGAATCTGAAGTCGCCGTTTGTTATTTCGTTGCTCGGTTTTTCTTCGGACCGGCGCGGTCGGAAGCTGGTTCTGGTTTACGAGCTGATGCCGAACCGGAGTTTGCAGGATGCGTTGCTGGACCGGCGGTGTCCGGAGCTGATGTCTTGGGGGAAGAGGTTTGACATCGCCGTTTCGGTGGCGATGGGGTTGGAGTATTTGCACCACTCTTGTGAGCCTCCGGTGATTCATGGGGATATAAAGCCGAGTAATGTGTTGCTGGATGAGGATTTTGGAGCGAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGGCGGTGGAGGATCTGGGAATGGTGGAGGAGAAGAAGGAAGGGGTTGTGGAAATTGCGGTCGAGGAGTTTGGGGTGACGGAGGAGGGGGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCTGTGAGGGCTGTCGATTACTCGGACGCGTCCCCGGTAGGGGGTGATAAGTTGAGTGTGGTGTCGGATGGGTGCTTTGAGAGTGTGGAGAACGAGAATGGGAATGTTAATGGGAATGAGAAAAGTAAAAAGAAGGAGAGGAAGAGGCTGGATTGGTGGGCGTCTCTCGATGAGGAGAAGGTTAAGAATAAGGTGAAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTTTGTGAGGAGTTGTCTAAGAAGAGTAAGAAGAAGAAGAGGGGTTTGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAAGAGGAAGAGTAAGGGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGATTGAGTGGGGAGATAAGGAACAATGGGAGGAGGAACAGCCAGGATTGGGGGATTAGTGGGGATGTGCCGAAGAGTGGTGGGATCAGTAGCACTCCTAGTATGAGGGGGACTGTGTGTTACATTGCTCCTGAGTATGGTGGAGGAGGGCAATTGTCTGAAAAGTGTGATGTGTACAGTTTTGGGGTTCTGCTTTTGGTTCTGGTGGCGGGGAGGCGGCCGCTGCAGGTGACCGCATCGCCGATTTCTGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTTTTAGATCTTGTTGACACTTCTATTCATTCATTGGATAAGGAGCAGGCGCTGCTCTGCATCACCATAGCCTTGTTGTGTTTGCAGAGGTGCCCAGGGAAGAGGCCTTCCATGAAGGAGGTTGTGGGAATGCTCAATGGGGAAGCTGATCCACCACATTTACCGTTCGAATTCTCACCGTCACCGCCGTCAAATTTCCTGTTCAAGGGACGGAAGAAGGCTCGAGACTAA 1728 0.5417 MPSRPPPPSPHAAVSAISHRREMILCGVIGGALFLTALIVSVTVFLYRKLSYNRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSIQGEREFHNELTLCSNLKSPFVISLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMSWGKRFDIAVSVAMGLEYLHHSCEPPVIHGDIKPSNVLLDEDFGAKIGDFGLARVKAVEDLGMVEEKKEGVVEIAVEEFGVTEEGESVSVVDVDRSPESCPVRAVDYSDASPVGGDKLSVVSDGCFESVENENGNVNGNEKSKKKERKRLDWWASLDEEKVKNKVKKNRKPREWWKEEFCEELSKKSKKKKRGLEWWQREEEGVEQKKRKSKGSRGSIDWWLDGLSGEIRNNGRRNSQDWGISGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRCPGKRPSMKEVVGMLNGEADPPHLPFEFSPSPPSNFLFKGRKKARD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00790 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Vian9g00790 575 SUPERFAMILY Protein kinase-like (PK-like) 51 562 IPR011009 -
Vian9g00790 575 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Vian9g00790 575 Pfam Protein kinase domain 80 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00790 575 Pfam Protein kinase domain 413 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00790 575 Gene3D Transferase(Phosphotransferase) domain 1 156 249 - -
Vian9g00790 575 Gene3D Transferase(Phosphotransferase) domain 1 403 550 - -
Vian9g00790 575 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Vian9g00790 575 ProSiteProfiles Protein kinase domain profile. 77 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00790 575 SMART serkin_6 77 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00790 575 FunFam Os07g0541700 protein 156 244 - -
Vian9g00790 575 PANTHER OS07G0586332 PROTEIN 311 574 IPR044576 -
Vian9g00790 575 MobiDBLite consensus disorder prediction 552 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00790 Vian-Chr9 10991893 10993947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00790 422 544 Receptor kinase-like Gene Family AT3G58690 37.209 7.96e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vian9g00790 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00790 - - gmx:100814933 831.632