Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00785 ATGAACGCTCCTTATTTCAGTGGGTCCCAGCGCTCCGATTCTGAACTCCGCCTCGTTAACAATCGTACCTTGCCGTTACCCGCTAACGACCTCACGTGGTCCCTTTCGCTACCCGAGGGCGCGGATCGCGACCACGTGTACTGCAATCCGACGGCGGCGGAGGCCGTTTACGGAGACAAAATCGGACGGCTGCCTGCGTGTTTCATCAACGGATACGGTGGAGATCCTTTGGTGGACAAGCAGAAGGAGTTGGCAAAGATTTTGGAGACGCGTGGCGTGCGCGTAGAGAAATGTTTCGTGGAGGACGGGTACCATGCTGTGGAGATCTATGATGAAGCTAAGGCCCTCGCTTTGGGCCAATATATTAAGAACTTCGTCCTCTCTTTGACTTCTCAATCCTCTATTTGA 408 0.5368 MNAPYFSGSQRSDSELRLVNNRTLPLPANDLTWSLSLPEGADRDHVYCNPTAAEAVYGDKIGRLPACFINGYGGDPLVDKQKELAKILETRGVRVEKCFVEDGYHAVEIYDEAKALALGQYIKNFVLSLTSQSSI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00785 135 Pfam alpha/beta hydrolase fold 19 107 IPR013094 GO:0016787
Vian9g00785 135 Gene3D alpha/beta hydrolase 1 132 IPR029058 -
Vian9g00785 135 SUPERFAMILY alpha/beta-Hydrolases 3 111 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00785 Vian-Chr9 10846645 10847052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00785 4 113 Carbohydrate Esterase AT5G16080 33.036 1.10e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00785 - - pvu:PHAVU_010G086500g 230.335