Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00766 ATGGCTTCTTCTTCATCTTCTTCTTCTTCACTAATCTTCATGTCCATCCTCCTCCTCCTCCTCTTGTACCTCCACTCTTCGGCGGCGCTCCCCCTCTCCGTGGAGAGACCCGACGAAGACGTGATAGTTTCGTCGCCGAAGGGGACGTTCACGGCGGGGTTCAGGAACGTGGGGGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCGGAGAAGCACGTGGTTTGGATGGCCAACCGCGACGTTCCGGTGAACGGGAAACGCTCCTCGCTCTCCCTGCTCAAGAACGGCAACCTCGTGTTGTCTGACGCCGGACAGTTCGACGTTTGGGACACCAAGACTCTGTCGGAGCAGCCGTTGGAGTTGCATTTGCACGACACCGGGAACCTCGTGCTCCTGGAACAGACCAATAGAAGCTCTGTGTTGTGGGAAAGCTTTAATTTTCCGACTGATACACTCCTCCCTGGCCAGCTTCTCACCAGGTTCACGAAGCTTGTCTCTGCGAGAAGTGAGGGCAACTATTCCTCTGGGTTTTACAAGCTCTTCTTCGACAACGACAACGTTTTCCGTCTTTTGTACGAGGGTCGTCAAGTTTCAAGCGTTTATTGGCCGGATCCTTGGCTGGTTAGCAACAACGTTGGGTTTGGTAACGGAAGAACCTCGTACAATAGTAGCAGAGTTGCAGTTCTAGATGATTTGGGTCTATTCAGTGTTTCTGATAAATATAGTTTAACGACAATTGATTATGGGTTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAATGTTCGTATCTATAGCAGAGAAAACGGTCAAGAAGATTGGTCAATAGCAGGGCAATTTAAATCACAACCTTGTTTCATTCATGGGATCTGTGGACCTAACAGTATATGCAGTCATGATAAAGCAATTGGTAGAAAGTGTGAGTGTCTTGAAGGGTATAGCTGGGTTGATAGCCAAGATTGGTCTTTGGGTTGCACACCAAAATTCAAAACTACCTGTGATAACAAGACAGAATATCGCGTAGTGCCTCTCTATGAAGTGGACTTTTATGGATATGACTATGGAACTTCCTTTCAAAATTACACATATAAACAATGTGAGAAACTGTGCTTGGAGGTGTGCGAGTGCTTGGGCTTTCAGTACAGCTTTGCTGTAGAGAATGGGAACTTTTGGTGTTACCCAAAGACGAAGTTGCTAAATGGACACCATTCACCCGGTTTCCCAGGGCAATTTTTCGTGCGTCTGCCAAAAGAAAGTGCTCAAGAGAACCACCTGCAAAACAATGATGGCTTGGTTTGTCCGAGAAATGCAGAAATGCTACTAGAAAGACCATATGTGAAAGGCAAGGAAAATGGGTCTGTGAAGTTCATGCTTTGGTTTGCAGTTGGCTTAGGAGGGTTTGAGGCGGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAGTAGCGACCATTTGGTCAGGGCAGACCAACAAGGGTATGTTCTTGCTGCAGCTACAGGGTTCAGAAGGTACACATACTCTGAACTGAAACAAGCCACAAAGGGTTTCAGTGAAGAGATCGGAAGGGGTGCAGGAGGGACAGTGTACAAGGCTGTGTTATCAGATAACCGAGTTGCAGCAATAAAAAAGCTGCACGAATTTGCGGACCAAGGAGAGAGTGAGTTCCTCACTGAAATGAGCATCATTGGAAGGCTCAATCACATGAACTTGATCGGCATGTGGGGGTATTGTGTGGAAGGAAAACACAGGATCCTGGTTTATGAGTACATGGAAAACGGCTCTTTGGCTAATAATCTTCCATCAAATTCACTTGATTGGAGGAAGAGGTACAACATTGCAATGGGAATGGCAAAGGGTTTGGCCTATTTACATGAAGAGTGCTTGGAGTGGATCTTGCACTGTGATATCAAGCCTCAAAACATACTTCTTGACTCTGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCCTTGAATAGAAACAACCTCAACAACTCAAGCTTCTCTAGAATAAGAGGCACAAGGGGTTACATGGCACCAGAATGGGTTTTCAACTTGCAAATCACTTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCAATGATTGGAGTCCAAGTGACAGAACCAGGGCAAGATTCGCATAATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGAAGGAAAACACCAGAAGGAACATCTTGGGTGGAACAAATTGTTGACCCCACTTTAGGATCAGATTACAACGTAAAGAAGATGGAGATTTTGGCAACAGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCTAGCATGAGTCAAGTCGTTGAAAGACTCCAAAATCATGAACACGGTTCTTGA 2418 0.4628 MASSSSSSSSLIFMSILLLLLLYLHSSAALPLSVERPDEDVIVSSPKGTFTAGFRNVGENAYCFGVWFSQAEKHVVWMANRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEQPLELHLHDTGNLVLLEQTNRSSVLWESFNFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGRQVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLDDLGLFSVSDKYSLTTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSIAGQFKSQPCFIHGICGPNSICSHDKAIGRKCECLEGYSWVDSQDWSLGCTPKFKTTCDNKTEYRVVPLYEVDFYGYDYGTSFQNYTYKQCEKLCLEVCECLGFQYSFAVENGNFWCYPKTKLLNGHHSPGFPGQFFVRLPKESAQENHLQNNDGLVCPRNAEMLLERPYVKGKENGSVKFMLWFAVGLGGFEAVCIFMVWCFLFRSSDHLVRADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKAVLSDNRVAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNSLDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKPLNRNNLNNSSFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTEPGQDSHNERLATWVREKRRKTPEGTSWVEQIVDPTLGSDYNVKKMEILATVALECVEEEKDVRPSMSQVVERLQNHEHGS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00766 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 205 IPR036426 -
Vian9g00766 805 CDD STKc_IRAK 525 800 - -
Vian9g00766 805 Gene3D Phosphorylase Kinase; domain 1 486 594 - -
Vian9g00766 805 SMART serkin_6 519 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00766 805 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00766 805 FunFam Serine/threonine-protein kinase 595 805 - -
Vian9g00766 805 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Vian9g00766 805 CDD B_lectin 44 150 IPR001480 -
Vian9g00766 805 CDD PAN_AP_plant 333 420 - -
Vian9g00766 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Vian9g00766 805 PIRSF SRK 2 804 IPR024171 GO:0004674
Vian9g00766 805 Pfam Protein kinase domain 522 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00766 805 FunFam S-receptor-like serine/threonine-protein kinase 488 594 - -
Vian9g00766 805 SMART blect_4 33 150 IPR001480 -
Vian9g00766 805 Pfam S-locus glycoprotein domain 255 318 IPR000858 GO:0048544
Vian9g00766 805 Gene3D - 35 148 IPR036426 -
Vian9g00766 805 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Vian9g00766 805 PANTHER OS07G0415500 PROTEIN 7 799 - -
Vian9g00766 805 Pfam D-mannose binding lectin 75 161 IPR001480 -
Vian9g00766 805 SUPERFAMILY Protein kinase-like (PK-like) 503 798 IPR011009 -
Vian9g00766 805 Gene3D Transferase(Phosphotransferase) domain 1 595 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00766 Vian-Chr9 10260641 10263197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00766 482 805 Trihelix Transcription Factor Family AT5G38560 39.514 4.10e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vian9g00766 Pkinase 7.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00766 - - gmx:100806357 1367.83