Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00760 ATGGCTGGTGATTCTTCTGGAGACGTTGATCTAAGGTTGGGAGAACCTAAGGGGCCGAAACTGGAGCCCGAGACGGAGCAGGGTTCCGCGATACGTGTGATGCCGGTGGCTGTGCACGTGCCGTCAGGGATGTCCATGACTGTGTCCAAGGCCCTGGCCCAAGCCCAGGCCCAACCTCAGAAACGGGCCTCCACTAAAGACCGTCACACCAAAGTCGAGGGGCGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCGCGGATCTTCCAGCTCACCCGAGAGCTAGGTCACAAATCAGACGGTGAAACCATCCGTTGGCTCCTCGAACACGCCGAGCCCGCTATCATAGCCGCCACCGGCACCGGCACCGTCCCCGCCATCGCCATGTCTGTCAACGGCACGCTCAAGATTCCGACCACCTCTCCCTCCGACCCGGAACTCGGAGACCCACCGGAGAAAAAGAAGCGCAAGCGACCTGCAAACAGCGCCTACGTGGACGTAAACGACGGTGCCGTTTCAGTCCCCGCCGGCCTCGCGAGCTCGAACAAGCAAAGCTCAAGGACGATCACGACGACCGCCTCAACGACGACCCCAATTCCGCAGCACACCGCGATTCCGCTGCCGCAGGGCGTGGTCCCCGTGTGGGCCGTGCCTTCAAACGCTGTCGTTCCGACTGCAGGCGCGTTCTTCGTCGTCCCCCAAGCCGCGTCGTTTCAGCACCATCCGCAGTTTTTCACCATAGCACGACCAATCTCCGCGTTTGTCTCCTCCATGGTCACCCCTGTTCAACTCCAACCAACCTCCACATCCTCTTCTGCAAACGCTAACCCTTCCTCCACTGCGCCGTCGTCGAAGTCCCCGGCGAGAGCCACCGTCATGGCTCCCACCACCACCACTACAACACACATGCTGAGAGATTTTTCGTTGGAGATTTACGACAAGCAAGAGTTGCAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 987 0.6049 MAGDSSGDVDLRLGEPKGPKLEPETEQGSAIRVMPVAVHVPSGMSMTVSKALAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDPELGDPPEKKKRKRPANSAYVDVNDGAVSVPAGLASSNKQSSRTITTTASTTTPIPQHTAIPLPQGVVPVWAVPSNAVVPTAGAFFVVPQAASFQHHPQFFTIARPISAFVSSMVTPVQLQPTSTSSSANANPSSTAPSSKSPARATVMAPTTTTTTHMLRDFSLEIYDKQELQFMSRASSKH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00760 328 MobiDBLite consensus disorder prediction 52 75 - -
Vian9g00760 328 ProSiteProfiles TCP domain profile. 65 119 IPR017887 -
Vian9g00760 328 MobiDBLite consensus disorder prediction 148 163 - -
Vian9g00760 328 MobiDBLite consensus disorder prediction 1 29 - -
Vian9g00760 328 MobiDBLite consensus disorder prediction 136 164 - -
Vian9g00760 328 MobiDBLite consensus disorder prediction 266 300 - -
Vian9g00760 328 Pfam TCP family transcription factor 64 166 IPR017887 -
Vian9g00760 328 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 287 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00760 Vian-Chr9 10098487 10099473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00760 59 327 TCP Transcription Factor Family AT2G45680 55.263 4.60e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vian9g00760 TCP 7.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00760 - - pvu:PHAVU_010G089100g 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00760 9 10098487 10099473 Vian9g00760 9 10098487 10099473 ECH