Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00754 ATGGAACGCAGGCCGAGGATGCTGAAGGACTTCCTCAGCGACAACCTAAACTCTTGTTCCTCAAGCGGTTTCAAATCACTTCCAAGAAAACCAACAAGCATGCACACCCTCATAGAAATGGAACTCAAATCATCTTCATCACCACCATCAAACTCACCCTTCCAGACACTCATGAACACCATTAGAAGCATCTCTTTCTTCACCTCAGTGAGAAAATCACCCTCCGTGCTTTCCCTTCCCAGAAGCCTCTCTCGCAAACTCTCATCGTCAAGGAGAAGAACAACAACAAGAAGCAGAAGCCAAGGATGCAACGATATCAGCATCACAACGGTGAAGATCAAGGACATCATGCGGTGGAAATCGTTCAGGGACATCGTCGAACCTCCCCCACCACCTTTGGATTTCATGGTGGACCCCACTGCCACAACCACCACCGCCACCTGGAGTATCAGCACTGGCTCTAGTTGGAGTGAGAGCGACTTTTTAACCTCTTCGAGGGAAGATCCACAAAACGACAGCGTTGAAGCTGGTAAAAAGTTTTCCTTTTCACCCCTCGTTGTCGGCAAGGACCCCATAGCCACGGAAGCTTTAACTTGCCAAGAAGAACAAAACAGTCCAGTTTCTGTTCTTCAGGTTGGAGAAGATGAATTCTCACCCTTTGATCAAAGCCTTGCCAATATTCAAAGGAGAAAGCAGAAGTTCATAGAAACAGTTCAGAAATTGGAGAGTCTTGCAAAACTTGACCTTGTAGACTTAGATCAATGCCTCTCATTGGATGAAAACTCTCTCTATGATGAAGAGTACGAAGAAGATGATGATGATGATGACGACGACATTGGAGAAGAAGGTTGGAGTGAGAAAAAGGCAGAGCAACTGCTACATTGTGTTAAAGCAAGATGTTCAGCAGATGGTTGTAAAGACCATTTGGATACACTTCTGTTGGATTTTTTCAGTGAAGAACTGAGTGGAAATAGAAAGCAGTATAATGAAGAGGAGTTGAAAACTTTGAGAATAGCTGAGGATTGGATAAATGGATCATTTGCTTTTGATGCAGGGCTTGCTGATAAACAAGCTTACATCAAGGACATGGAAAAGAGAGATCAGTGGAACATGTTTAAGGAGGAGCAAGAAAAACTAGCTTTTGAAATTGAGAAAGCTATATTTCATAGTTTGGTTGCTGATCTTGTTGACTCCGAAGGTTAA 1203 0.4364 MERRPRMLKDFLSDNLNSCSSSGFKSLPRKPTSMHTLIEMELKSSSSPPSNSPFQTLMNTIRSISFFTSVRKSPSVLSLPRSLSRKLSSSRRRTTTRSRSQGCNDISITTVKIKDIMRWKSFRDIVEPPPPPLDFMVDPTATTTTATWSISTGSSWSESDFLTSSREDPQNDSVEAGKKFSFSPLVVGKDPIATEALTCQEEQNSPVSVLQVGEDEFSPFDQSLANIQRRKQKFIETVQKLESLAKLDLVDLDQCLSLDENSLYDEEYEEDDDDDDDDIGEEGWSEKKAEQLLHCVKARCSADGCKDHLDTLLLDFFSEELSGNRKQYNEEELKTLRIAEDWINGSFAFDAGLADKQAYIKDMEKRDQWNMFKEEQEKLAFEIEKAIFHSLVADLVDSEG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00754 400 PANTHER OS04G0572500 PROTEIN 2 397 - -
Vian9g00754 400 MobiDBLite consensus disorder prediction 151 170 - -
Vian9g00754 400 Coils Coil 224 244 - -
Vian9g00754 400 MobiDBLite consensus disorder prediction 151 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00754 Vian-Chr9 10004443 10006389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00754 1 394 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 30.963 2.21e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00754 - - var:108346936 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00754 9 10004443 10006389 Vian9g00754 9 10004443 10006389 ECH