Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00732 ATGAGTTTTGGGGGTTTTCTTGAAAACAAATCAGGTAGTGGCGTAGCCAGACACGACCTTTCGGATATTCCTTACAGCAACGTTACCACCACCACCCATACCAACACCAACGAAGACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACCACCACCACTCCAACCCTGGCCAAATCCATGTTCAACTCCCCAGGACTATCTCTGGCACTTCAAACCAATATAGATGGACAAGAAGATGTGAATAGAATGGTCGAAAATAGCTTCGAACCAAACGGTTTGCGAAGAAGCAGAGAAGAAGAACATGAAAGCAGATCTGGCAGCGACAACATCGACGGCGCTTCCGGCGATGAACAAGATGCCGCCGACAACCCTCCCAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTCGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAGAAGCAAAGACTCGAACTTAGCAAGAGACTGTGCTTGGAAACTCGACAGGTGAAGTTTTGGTTCCAAAACCGGAGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACTTTGCTAAGGCAAGAGAACGACAAGCTGAGAGCGGAGAACATGTCTATCAGGGACGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGCCCTGCCATCATCGGCGAGATTTCGCTGGAGGAGCAGCACCTTCGGATTGAGAACGCCCGGTTGAAGGACGAGCTCGATCGCGTGTGTGCACTCACGGGCAAGTTTCTGGGTCGCCCCGTTTCTTCGTTACCGAATTCAAGTTTGGAGCTTGGCGTTGGGGGGAACGGATTTGGTGGAATGAGCATAGGCACTACATTGCCTTTGGGACAAGATTTTGGAATGGGAATGTCGATGTCTGTGTCTAACAACCCTTTGGCTATGGTGTCTCCCACTAGTACCCGACCAACTTCTGTTGTGGGTGGGTTTGATAGGTCCATGGAAAGGTCCATGTTTCTTGAGCTTGCTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCTCAAACTGGGGAGCCTCTTTGGGTGAGGAATGTTGAAGGTGGGAGGGAAATCATGAACCATGAGGAGTACGCGAGAACCTTCACTCCTTGTATTGGTTTGAGACCAAATGGGTTTGTGTCCGAAGCCTCTAGGGAAAATGGCATGGTCATCATTAACAGTTTGGCACTTGTTGAGACTCTCATGGACGCGAATCGATGGGCAGAAATGTTTCCTTGTATCATTGCAAGAACCTCCACTACTGAGGTGATATCTAACGGGATAAATGGATCAAGAAATGGAGCACTTCAATTAATGCATGCCGAACTTCAAGTTCTTTCGCCTTTGGTTCCTGTTCGTGAGGTCAATTTCCTAAGGTTTTGCAAGCAGCACGCAGAAGGGGTTTGGGCAGTGGTCGATGTGTCCATCAGAGAAAGTTCAGGAGCACCATCCACTTTTGTCAACTGTAGGAGGCTTCCTTCTGGTTGTGTTGTGCAAGACATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCACGCAGAATACGATGAGAGCCAAATTCACCAGGTTTATAGACCATCGTTGAACTCAGGCATGGGGTTCGGTGCTCAGCGTTGGGTGGCTACCCTTCAACGGCAATGCGAGTGTCTTGCGATCTTAATGTCCTCAGCAGCACCCTCTCGAGACCATTCAGCAATAACAGCGGGGGGGAGGCGGAGCATGGTGAAGCTGGCGCAGCGAATGACCAACAACTTCTGCGCCGGAGTGTGTGCCTCCACGGTGCACAAGTGGAACAAGCTCAACCCCGGGAACGTGGATGAGGACGTGAGGGTGATGACAAGGAAGAGCGTGGATGATCCCGGCGAGCCGCCGGGGATTGTGCTGAGCGCCGCCACCTCCGTTTGGCTCCCGGTGTCGCCGCAGAGGCTCTTTGACTTCCTTCGGGACGAGCGCCTCCGAAGCGAGTGGGACATACTCTCCAACGGCGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACTGCGTCTCTCTCCTCCGAGCCAGTGCCATAAACTCCAGCCAGAGCAGCATGCTGATATTACAGGAGACATGCATAGACGAGGCAGGGTCGCTTGTGGTGTACGCGCCGGTGGATATTCCGGCCATGCATGTCGTTATGAACGGTGGTGATTCAGCTTATGTGGCACTGTTGCCATCGGGATTTGCTATTGTTCCTGATGGACCCGGGTCTCGTGGGTCACAGAATGGGCCTACTGCCGCAACAAACGGTGGTGATAATGGTGTGGCACGCGTGAGTGGGTCCCTTTTAACGGTTGCGTTTCAGATCCTTGTGAATAGTCTTCCTACAGCCAAGCTCACAGTAGAGTCCGTGGAAACCGTGAACAACCTCATATCATGCACCGTTCAAAAAATCAAAGCTGCTCTGCACTGCGAAAGTTAA 2490 0.5209 MSFGGFLENKSGSGVARHDLSDIPYSNVTTTTHTNTNEDDRMPFGAISQPRLVTTTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRMVENSFEPNGLRRSREEEHESRSGSDNIDGASGDEQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALTGKFLGRPVSSLPNSSLELGVGGNGFGGMSIGTTLPLGQDFGMGMSMSVSNNPLAMVSPTSTRPTSVVGGFDRSMERSMFLELALAAMDELVKMAQTGEPLWVRNVEGGREIMNHEEYARTFTPCIGLRPNGFVSEASRENGMVIINSLALVETLMDANRWAEMFPCIIARTSTTEVISNGINGSRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIRESSGAPSTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQVYRPSLNSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSSQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQNGPTAATNGGDNGVARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00732 829 FunFam Homeobox-leucine zipper protein GLABRA 2 338 559 - -
Vian9g00732 829 FunFam Homeobox-leucine zipper protein HDG1 118 204 - -
Vian9g00732 829 MobiDBLite consensus disorder prediction 91 138 - -
Vian9g00732 829 MobiDBLite consensus disorder prediction 1 20 - -
Vian9g00732 829 MobiDBLite consensus disorder prediction 25 44 - -
Vian9g00732 829 Gene3D - 406 558 IPR023393 -
Vian9g00732 829 Coils Coil 182 214 - -
Vian9g00732 829 SUPERFAMILY Bet v1-like 330 560 - -
Vian9g00732 829 Pfam Homeodomain 131 186 IPR001356 GO:0003677
Vian9g00732 829 MobiDBLite consensus disorder prediction 95 111 - -
Vian9g00732 829 SUPERFAMILY Bet v1-like 587 822 - -
Vian9g00732 829 CDD homeodomain 130 188 IPR001356 GO:0003677
Vian9g00732 829 ProSitePatterns 'Homeobox' domain signature. 163 186 IPR017970 GO:0000981|GO:0006355
Vian9g00732 829 CDD START_ArGLABRA2_like 333 559 - -
Vian9g00732 829 ProSiteProfiles 'Homeobox' domain profile. 128 188 IPR001356 GO:0003677
Vian9g00732 829 SMART HOX_1 129 192 IPR001356 GO:0003677
Vian9g00732 829 Gene3D - 117 204 - -
Vian9g00732 829 SMART START_1 338 560 IPR002913 GO:0008289
Vian9g00732 829 SUPERFAMILY Homeodomain-like 117 188 IPR009057 -
Vian9g00732 829 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 127 826 IPR042160 -
Vian9g00732 829 Pfam START domain 338 560 IPR002913 GO:0008289
Vian9g00732 829 MobiDBLite consensus disorder prediction 25 42 - -
Vian9g00732 829 ProSiteProfiles START domain profile. 329 563 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00732 Vian-Chr9 9499381 9504624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00732 1 829 Homeobox Transcription Factor Family AT3G61150 65.161 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Vian9g00732 START 4.5e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00732 K09338 - gmx:100811873 1477.61