Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00704 ATGGATGTAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTAGATGGTTTGGATTCTTGCACTGTATTTGGCGGGAGAGGTTTTTGTTGCGCTTTTCTCGGCAAGTCGAGGACTATTTCGAAGGCTCGTTTTAGTGGAACGAACAAGATAGGTAGTTGGAGTTGTTCGAGAGTAGACTGTTTCGAAGAGTTGAAAGTTTCGAGTGGGAAGAGGAGTATGTATTGGAAGAGAAATAAACTTTTTAGGGGGAGTAGGAAAATTTGGACAAAGTGTCAGGGTAACGATTCTTTATCATATGTCAATGGCAATGGGCGGAATGTTGATAGGGTGGAAAGTGCGGATGAGGACTCTGGTTCCAGTGCTGAATCTTGTGAATCTTTGGGTGAAAAAGGGCAAGAAGGGAGGAAAGAAGCTGGGGGTGAAGTTGCGGAGGATCAAAATGTGGATGAATTGAAAGAACAGCTGCAAAAGGCCAAGAAAGAATTAGAAGCCGCTCGAGAAAACAGCGTTGCATTTGAGGAAAAGGTTAAGAAGATATCAGAGACTGCGATTTTCTTGCAAGATGAAGCAGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGGGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCCCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCTTACGAGGCTACAAAAGAAGCTTACGATTCCTCACAAGGTTCTAACAACATTAATGATGATAAAGACATAATGCAGGAAGCGAAGGAACTTTTGGATGCTCAGGAAGATATCAAGGAATGCCAGACAAATTTATCAAATTGCGAGGATGAGCTGAGAGGCTTGCAATGTAGAAAGGAGGAGTTGCAGAGTGAAGTGAACAATTTGCATGAAGTTGCAGAACAGGAGCAGCTGAAAGCAGCAAAAGCAGATGAAGATGTTGCAAGCATAATGCTTTTAGCGGAAAAAGCTGTTGCTGCCGAAATTGATGCTTCACAACAGGTGAATGATGCAGAGATTGCATTACAGAAAGCAGAAAAAATTGCCTCTAGTCTTAAAGCTGATACCAAAGACAGTCTACAAGTACAAGAGATTGTAGCTATTCCCGAGGACGAGGAAGTGGGTCAAGGCTTTTCTGGTGATGATGTCGTTAAAAGGGAGGCTGATCTTTCAAATGATGATGAGCTTTTGCTGACCGAAACAAAATCTGACAACAGTAGGCAAAGTTTGGAAGACATGGCACAGTCTGATTATCTGAGTGATCGTGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGAATGTAGTACAAACAAAAAAGCAGGAAACACAAAAAGATTTGACTAGAGATAATTCATCCTTTTTTCCAAAGGCATTATTGAAGAAATCTTCCCGATTTTTTCCCGCATCATTCTTCTCTTTTACTGCCGATGAGACTGATTACACACCTGCATCAGTTTTCCATGGTCTTATGGAGTCTGCACAGAAGCAACTAGCCAAGCTAATTGTTGGGTTATTGCTAATTGGAGCAGGGCTTGTACTCTATAGCAATAGAGCCGAGAGGGGTGCTCAGCTGCTTCAGCAACCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGAAGGCTTCAGGATCTTCCCAGGAGAATTAAGAAAATCATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTCCTTGCAAGTGTTGTATTTGTACCAATTTTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCATATGGTCTTTCCATTATTCGTCATGTACATGGGACAAAAGCAATAGCCGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGCTTGGAGCTTTCTGTTGAAAGGCTTAGTTCAATGAAGAAGTATGTCTTTGGATTGGGATCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTGGTAGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGTCTAGCATTATCATCAACTGCTGTTGTTTTGCAAGTGTTACAGGAGAGAGGTGAAAGCACATCACGGCATGGAAGGGCTACGTTCTCGGTTTTACTTTTTCAGGATTTGGCAGTGGTTGTCTTGCTAATACTCATACCTCTAATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCACTTGGTTTGGCCGCTGTTAAGGCATTGATTGCCATTGCTGCCATAATTGCAGGTGGACGATTGCTCCTGCGACCCATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTCGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCAATGGCATTGGGGGCATTTTTGGCAGGTTTACTATTGGCAGAAACAGAGTTTTCCTTACAGGTTGAATCTGATATTGCCCCGTACCGTGGCCTTCTTCTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTTCAGTCGTTACTGGGACCTTGGGACTTTTGATATTTGGCAAGACTTTGTTGGTTTCTTTAATTGGTAGAATATTTGGTATTTCTCTCATTTCTGCTATTAGAGTTGGCCTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCCTTACTGTTTCTTGTTGTGGGGATTTCAATGGCCCTCACTCCTTGGCTAGCTGCAGGAGGGCAGTTCCTTGCTTCCCGTTTCGAGGTGCATGATGTGCGAAGATTATTACCTGTAGAAAGTGAGACAGACGATTTGCAAAATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAAATCATCGCACAACTTCTTTCTGAACAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGACGTGCCCTGGATCTTCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGAGCTGAAAGGGCTAGTGCCGCTGCAATAACTCTGGATTCACCTGGAGCTAATTATAGAACAGTTTGGGCTTTGAGCAAACACTTCCCAAACGTCAAAACTTTTGTACGCGCTCACGATGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGCCTTCAACTAGCTGCTGCAGTTCTTGCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACCATAAACGAATTCAGATCTCGTCATCTATCTGAGCTCACTGAACTATCTGAAACAAACGGAAGTTCTTTTGCATATGGATACAATAAAATTGCAATCAAACCCAATTCGTCAGACGATACTCAGTTTTCGGAAGGGAAACCGGCGACATGA 3588 0.43 MDVAFRLPQSNVVLDGLDSCTVFGGRGFCCAFLGKSRTISKARFSGTNKIGSWSCSRVDCFEELKVSSGKRSMYWKRNKLFRGSRKIWTKCQGNDSLSYVNGNGRNVDRVESADEDSGSSAESCESLGEKGQEGRKEAGGEVAEDQNVDELKEQLQKAKKELEAARENSVAFEEKVKKISETAIFLQDEAASAWNNVTSTLDIIQDIVGQEFVAKEAVQKATMALSLAEARLQVAIESYEATKEAYDSSQGSNNINDDKDIMQEAKELLDAQEDIKECQTNLSNCEDELRGLQCRKEELQSEVNNLHEVAEQEQLKAAKADEDVASIMLLAEKAVAAEIDASQQVNDAEIALQKAEKIASSLKADTKDSLQVQEIVAIPEDEEVGQGFSGDDVVKREADLSNDDELLLTETKSDNSRQSLEDMAQSDYLSDRENGQLSLDSSKEAEVETEKSKNVVQTKKQETQKDLTRDNSSFFPKALLKKSSRFFPASFFSFTADETDYTPASVFHGLMESAQKQLAKLIVGLLLIGAGLVLYSNRAERGAQLLQQPEVIATTVEEVSSTAKPLVRRLQDLPRRIKKIIASLPDQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKALIAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFSVVTGTLGLLIFGKTLLVSLIGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMALTPWLAAGGQFLASRFEVHDVRRLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELSETNGSSFAYGYNKIAIKPNSSDDTQFSEGKPAT 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00704 1195 Gene3D - 592 977 IPR038770 -
Vian9g00704 1195 MobiDBLite consensus disorder prediction 418 436 - -
Vian9g00704 1195 Pfam Sodium/hydrogen exchanger family 601 972 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian9g00704 1195 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1001 1142 IPR036291 -
Vian9g00704 1195 Pfam TrkA-N domain 1005 1118 IPR003148 GO:0006813
Vian9g00704 1195 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 1168 - -
Vian9g00704 1195 Gene3D - 1000 1164 - -
Vian9g00704 1195 FunFam K(+) efflux antiporter 2 chloroplastic 1000 1164 - -
Vian9g00704 1195 Coils Coil 261 316 - -
Vian9g00704 1195 MobiDBLite consensus disorder prediction 405 463 - -
Vian9g00704 1195 FunFam K(+) efflux antiporter 2 chloroplastic 592 978 - -
Vian9g00704 1195 MobiDBLite consensus disorder prediction 437 463 - -
Vian9g00704 1195 Coils Coil 141 182 - -
Vian9g00704 1195 Coils Coil 345 365 - -
Vian9g00704 1195 MobiDBLite consensus disorder prediction 128 149 - -
Vian9g00704 1195 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 603 883 IPR004771 GO:0006812|GO:0008324|GO:0016020
Vian9g00704 1195 ProSiteProfiles RCK N-terminal domain profile. 1004 1126 IPR003148 GO:0006813
Vian9g00704 1195 MobiDBLite consensus disorder prediction 108 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00704 Vian-Chr9 9016793 9031836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00704 91 1191 Inorganic Solute Cotransporters AT4G00630 69.258 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00704 K03455 - gmx:100791174 1855.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00704 9 9016793 9031836 Vian9g00704 9 9016793 9031836 ECH
Vian2g00660 2 8677515 8698338 Vian9g00704 9 9016793 9031836 PCT