Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00702 ATGCTAGCACAGGTCACATCCCACTCCAATGTGGAAATTCAAGCTGAATATCCATTCTCTACAACAGTTCCTGCTACCTCATTGACACAGGTTCCTACAACTATTTCCACCACTGTGTCAGCTTCTAGGGTGACAGAATCCTTTGGTTTTTCTCACTCTGATAAAAAATTCCATTCTTCTGTTGTCATTGTTGACAAGCCCAATGATGATGGCTACAACTCGAGGAAGTATGGGCAGAAACATGTAAAGGGTAGTGACTTTTCTCGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTTAAGAAAAATCTTGAGCGATCTCTTGAGGGTCATGTAACTGCAATTATCTACAAAGGAGAGCACAACCATCAACATAAGATGAAAAAAGAATCTGGAACGAGTGACAGTGAGGAAGTTGGTGATCATGATGAAACTGAAATGGATGAGAAGTTCCGTGCACAAGGAAAAAAACAAGATAAGGGGAATAAGGAAATTGAGTATGAATCGGTTAGTGAAGATTCAAATGTTGTGGAAGATGATAAGTGA 549 0.3953 MLAQVTSHSNVEIQAEYPFSTTVPATSLTQVPTTISTTVSASRVTESFGFSHSDKKFHSSVVIVDKPNDDGYNSRKYGQKHVKGSDFSRSYYKCTHPNCPVKKNLERSLEGHVTAIIYKGEHNHQHKMKKESGTSDSEEVGDHDETEMDEKFRAQGKKQDKGNKEIEYESVSEDSNVVEDDK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00702 182 MobiDBLite consensus disorder prediction 120 139 - -
Vian9g00702 182 MobiDBLite consensus disorder prediction 120 182 - -
Vian9g00702 182 MobiDBLite consensus disorder prediction 146 171 - -
Vian9g00702 182 FunFam WRKY transcription factor 55 128 - -
Vian9g00702 182 SUPERFAMILY WRKY DNA-binding domain 66 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00702 182 ProSiteProfiles WRKY domain profile. 68 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00702 182 SMART WRKY_cls 68 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00702 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 161 IPR044810 GO:0003700
Vian9g00702 182 Gene3D WRKY domain 56 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00702 182 Pfam WRKY DNA -binding domain 69 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00702 Vian-Chr9 8997666 9000494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00702 2 137 WRKY Transcription Factor Family AT1G13960 47.887 8.30e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian9g00702 WRKY 2.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00702 - - vun:114179749 206.453