Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00696 ATGGGTATGAAGAAGGGTCCTTGGACTGCTGAAGAGGATGAGATTCTTGTCAATTATATCAACAAGAATGGTGGCCATGGAAGTTGGCGTTCTCTTCCCAAGTGGGCTGCTATAGCCTCTCAGCTACCAGGAAGAACAGACAATGAGATCAAGAACTTATGGAACACCCATTTGAAGAAACGTCTCATTTGCATGGGCCTAGACCCTCAAACCCACCAGCCACTCTCCTCTTCATGCAACCCTGATGGCAAGGCCCATGCAGCATCCACCTCAACCCGCCACATGGCCCAGTGGGAGAGTGCAAGGCTTGAAGCAGAGGCCAGGCTCTCAAGGGAGCCCTATTTGTTCAACAACTCCAACAAAACTGACTCTGACTACTTCCTCAGAATGTGGAACTCTGAAGTTGGACAATCTTTTCGTGGTGTGCACAAATCAGACAACAAAGGTAGCTGCCAAAGTCCCATTTCTCTAGGGTCATTGTCTGCTACCACTACCACAGATTTGGCTTCCAACCCTACAAGCATTGTGAAAGAGGATTTGATGTGGGGTGGTAGCAAGAAAATTGCCTCTGATTCATCAAGCTCTAGTGAACTAGAAGAAGACTCGTGTGACACTTCATTGCAGCTCTTGTTAGACTTCCCTATAAACAATGACATGAGCTTCTTAGAATGA 672 0.4702 MGMKKGPWTAEEDEILVNYINKNGGHGSWRSLPKWAAIASQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHQPLSSSCNPDGKAHAASTSTRHMAQWESARLEAEARLSREPYLFNNSNKTDSDYFLRMWNSEVGQSFRGVHKSDNKGSCQSPISLGSLSATTTTDLASNPTSIVKEDLMWGGSKKIASDSSSSSELEEDSCDTSLQLLLDFPINNDMSFLE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00696 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 62 IPR017930 -
Vian9g00696 223 SUPERFAMILY Homeodomain-like 3 65 IPR009057 -
Vian9g00696 223 ProSiteProfiles Myb-like domain profile. 1 58 IPR001005 -
Vian9g00696 223 CDD SANT 7 58 IPR001005 -
Vian9g00696 223 Gene3D - 3 63 - -
Vian9g00696 223 Pfam Myb-like DNA-binding domain 5 58 IPR001005 -
Vian9g00696 223 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 34 186 - -
Vian9g00696 223 SMART sant 4 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00696 Vian-Chr9 8913218 8915637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00696 1 223 MYB Transcription Factor Family AT3G61250 47.687 7.51e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian9g00696 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00696 K09422 - gmx:100788528 280.411