Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00676 ATGGCCAACAAGGGAAGTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAGTGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTATAATGGAGACATTAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTAGTTTGCCTGGAAAAGCTCTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGCAAAATTTTCTCTCGTTCTTTGCTAGCAAAGACCGTGGTATGTTTTCCATATCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTCATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCACAGGGTGTTTGATGCAATGGCTCTGGCGAATCCATGTTCCCTTGACAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGATTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGGTATGCATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAAAGAGGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACACTTTGTGCTATTTTGGGGAACTCGTCAACATTTAAGGCAAACCCTTATGCCGGTAACTCAAACTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGTAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGATTTCATTGGAAAAGCATTAACTGATAAGAAAAGAGAAGTTAAAAACTTCCAGGTTCTCAAATCCTTTGCTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATGCTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAAATGGACACAGAACTAGAAAGACTTGTTTGTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATGTTTGA 1941 0.4101 MANKGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSSLPGKALEIGDTIWLCDAQHADSKIFSRSLLAKTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVFDAMALANPCSLDKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMHGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDDFIGKALTDKKREVKNFQVLKSFAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADAEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERLVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00676 646 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 197 IPR025610 -
Vian9g00676 646 PANTHER TRANSCRIPTION FACTOR TT8 11 641 - -
Vian9g00676 646 Coils Coil 489 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00676 Vian-Chr9 8532372 8537116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00676 15 642 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 38.438 1.20e-112 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00676 - - gmx:100783746 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00676 9 8532372 8537116 Vian9g00676 9 8532372 8537116 ECH