Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00653 ATGTTCCTCTTTTTTATTCTCTTCATTCTCATTCTCCACACTTCCTCCTCCTCCGCCACCATCATTCTCCAAGGCAACGCCACTCTGCAAAGCCCCAACAACACTTTCCAACTGGGCTTCTTCAATTTCTTCCCAGGCCCGGGCCCGCCGAAATTCTACCTCGCCATCCGCCGCACCTCTTTGCCCAACCCCAACACCATTTGGGTCGCCAACCGCCTCCACCCCTCCCCCACCCAAGCCGCTTCATCCCTTGAACTCACCCCAACCGGTAAGTTACTCCTAACCCACTTCAACAACACTCTCTGGACCGCCGCCGGCGCCGCCACCGCCAACCTCACGCTCAAGCTTCACGATTCCGGAAACCTCGTCCTCCTCACTTCCGACGGCGTCGTTTCATGGCAGAGCTTCGATTCCCCCTCGGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCGCTCACCTCTTGGCGCACGGAGACGGACCCTTCCCCGGGGCTTTACACCCTGCGGTTGAAACCATCCTTCTACGGCGAGTTCGAGCTCGTCTTCAACGACACCGATTCGTACTGGTCCACCGGGAACTGGAGCAATGGGACATTCCTCAACATCCCAGAGATGACCATCCCCTACCTCTACGCCTTTCACTTCGCTGCGCCGTTCTCCCCCGCCGCGGCCTTCGGTTTCTCCGAACGCGCCATCGAGACGAGCTTCCGACCGCCGACGATGTTCCGCCTGGAGCCCTTCGGGCAGGTCAAGCAGTACTCGTGGAACAGCCAATCGGGGTCCTGGCAGATGTTTTGGTTCAAGCCGGAGAGTGTGTGCCAGGTTCGGGGACTCTGCGGGGGGTTCGGGGTTTGCACTGGGGACACATCCAAATTCTGTAAGTGTGTGAGCGGGTTTGAGCCTTTGGATGGTCATGGGTGGGGTTCTGGTGATTACTCTCAAGGTTGTCACCGTGTGGAAGCGGGGTGTGATGCGGGTGATGGGTTTGAAGATCTTGGTGCTGTGAGGTTTGGATTCGGGAATGTGAGCCTGGTCAAGGGGAAATCTAGAAGCTTTTGCGAGCGCGAGTGCTTGGGTGATTGTGGGTGCGTTGGGTTGAGTTTCGAAAAGCAGAGTGGGTTATGCAAGAAATTTTACGGTTCGCTTTCGGATTTTCGGAATTTAACCGCCGATGGTGAGAGTGAGGTTTTGCATGTTAGGGTTCCGAGCGGGGGATCTGGGAGGAAGGTGTTTGATTGGAAGGTTTTGAGTGGGGTTATTATTGGGTCGGTTGCGGTTTTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAGAGGAGGGTTGAGGGGAAGAAATTGGAAGAGGATGAGGAAGATGGGTTTGTGGGTGTGTTGAATTTGCGTGTGTTTTCTTACAAGGAACTTCAGTTAGCGACTCGGGGGTTTTCAGAGAAGATCGGGCACGGAGGGTTTGGGACGGTGTTTCAGGGGGAGTTGAGTGATGCTTCCGTTGTGGCTGTAAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAGGAGTTCAGGGCGGAGGTCTCCACGATTGGGAATATTCAACACGTGAATCTCGTGCGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACCGGCTTCTTGTTTATGAGTATATGCAGAACGGTGCTCTGAGTGTTTATTTGAGGAAGGAAGGGCCTAGTCTGAGTTGGGATGTTAGGTTCAGGGTGGCCGTTGGCACTGCTAAGGGGATTGCTTATTTACACGAGGAATGTAGATGTTGCATCATACATTGTGATATAAAGCCAGAGAACATTCTTTTGGACGGTGATTTCACAGCCAAGGTTTCTGATTTTGGGTTAGCAAAGCTGATTGGGAGGGACTTCAGTAGGGTGTTGGCGACTATGAGGGGAACGTGGGGGTATGTTGCACCGGAGTGGATTTCTGGTGTGGCAATTACAACAAAGGCAGATGTTTACAGCTACGGAATGACAATGCTGGAGCTGATCGGCGGTCGGAGGAACGTGGAGGCAGTGCCATCTGGCGGAGGAGAGAGTGGTACTGAAAGTGGAGGGAAGTGGTTCTTCCCACCATGGGCAGCGCAGCAGATAATAGAGGGAAATTTTGGTGAAGTGATTGATAAGAGACTTGGTAATGTGTATAACATTGAGGAGGCTAGAAGGGTTGGTTTGGTGGCAGTTTGGTGCATTCAAGATGATGAAGCAATGAGACCTACAATGGGTATGGTGGTGAAGATGTTGGAAGGGTTGGTGGAGGTAAGTGTTCCTCCACCACCAAAGTTGCTTCAAGCTCTGGTTACTGGGGATTCATTTCATGGGGTGAAGGCTATTTCAGGCAATGGTTTGTCTACTGGTGGAAGCTTATCAGATGGCAACTTGGAAGTTTCAACTGCTGATTCTGAATCATATACAGGGAATGTTTTTTCTCCATTAGATGTCAATGCCAATGTCAGTGTTCGATAA 2481 0.526 MFLFFILFILILHTSSSSATIILQGNATLQSPNNTFQLGFFNFFPGPGPPKFYLAIRRTSLPNPNTIWVANRLHPSPTQAASSLELTPTGKLLLTHFNNTLWTAAGAATANLTLKLHDSGNLVLLTSDGVVSWQSFDSPSDTWLPGMNLTRFNSLTSWRTETDPSPGLYTLRLKPSFYGEFELVFNDTDSYWSTGNWSNGTFLNIPEMTIPYLYAFHFAAPFSPAAAFGFSERAIETSFRPPTMFRLEPFGQVKQYSWNSQSGSWQMFWFKPESVCQVRGLCGGFGVCTGDTSKFCKCVSGFEPLDGHGWGSGDYSQGCHRVEAGCDAGDGFEDLGAVRFGFGNVSLVKGKSRSFCERECLGDCGCVGLSFEKQSGLCKKFYGSLSDFRNLTADGESEVLHVRVPSGGSGRKVFDWKVLSGVIIGSVAVLGVVVVTLLVMVKRRVEGKKLEEDEEDGFVGVLNLRVFSYKELQLATRGFSEKIGHGGFGTVFQGELSDASVVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSVYLRKEGPSLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTMLELIGGRRNVEAVPSGGGESGTESGGKWFFPPWAAQQIIEGNFGEVIDKRLGNVYNIEEARRVGLVAVWCIQDDEAMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKAISGNGLSTGGSLSDGNLEVSTADSESYTGNVFSPLDVNANVSVR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00653 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Vian9g00653 826 PIRSF SRK 1 806 IPR024171 GO:0004674
Vian9g00653 826 CDD B_lectin 22 139 IPR001480 -
Vian9g00653 826 CDD STKc_IRAK 483 756 - -
Vian9g00653 826 PANTHER OS07G0415500 PROTEIN 6 766 - -
Vian9g00653 826 CDD PAN_AP_plant 327 405 - -
Vian9g00653 826 SMART blect_4 20 139 IPR001480 -
Vian9g00653 826 Gene3D - 14 136 IPR036426 -
Vian9g00653 826 Pfam D-mannose binding lectin 66 151 IPR001480 -
Vian9g00653 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 52 197 IPR036426 -
Vian9g00653 826 SUPERFAMILY Protein kinase-like (PK-like) 461 754 IPR011009 -
Vian9g00653 826 Gene3D Phosphorylase Kinase; domain 1 442 551 - -
Vian9g00653 826 ProSiteProfiles Protein kinase domain profile. 477 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00653 826 Pfam Protein kinase domain 480 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00653 826 ProSiteProfiles Bulb-type lectin domain profile. 14 137 IPR001480 -
Vian9g00653 826 Gene3D Transferase(Phosphotransferase) domain 1 552 761 - -
Vian9g00653 826 FunFam Receptor-like protein kinase 4 439 551 - -
Vian9g00653 826 ProSiteProfiles PAN/Apple domain profile. 326 404 IPR003609 -
Vian9g00653 826 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Vian9g00653 826 Pfam S-locus glycoprotein domain 192 304 IPR000858 GO:0048544
Vian9g00653 826 SMART serkin_6 477 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00653 826 FunFam S-receptor-like kinase 5 552 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00653 Vian-Chr9 8076788 8079268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00653 467 763 Receptor kinase-like Gene Family AT5G20050 47.419 8.02e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vian9g00653 Pkinase 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00653 - - vum:124843753 1315.06