Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00631 ATGTCTGGTGTTGAGTCTGACCACAACAACATCAAAGGGGTACCAACTCATGGTGGACGCTACATTCAGTACAATATCTATGGCAACCTCTTCGAAGTTTCCAGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGTGCTTATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACAGGAGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAGAGGACCTTGCGAGAAATTAAACTTCTTCGGCACATGGATCATGCAAACATTATGTCCATTAGAGATATTATACGACCTCCTCAGAAGGAAAACTTCAATGATGTATACCTTGTTTCCGAGTTAATGGACACAGATCTCCATCAAATAATACGTTCCAATCAACCACTGACTGATGATCATTGTCGGTATTTTCTGTATCAATTGCTTCGAGGACTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTATTGAATGCCAATTGTGACCTTAAGATTGCCGATTTTGGCCTTGCTAGAACTACATCTGAAACTGATTTTATGACCGAGTATGTGGTCACTCGATGGTATCGAGCTCCCGAGTTACTTCTTAATTGTTCGGAATATACCGCAGCCATTGATATATGGTCTGTTGATCTGGAAGTTGGATCTACTTGTAAATTAGAGTTCCAACTTCTACAGCTTTATGCAATTGTGAATTATCTCTTACTTAAACCTAACACTGCAATGACAATTCTCATTTCTTTCAAAAAGCTGATTGGTTCACCCGATGATGCTAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAAACAGCTTCCTCAGTATCCAAAGCAAAACTTTTCTGCTAGATTTCCCATCATGTCTCCTGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGATCCTAACAGGCGTATTACAGTTGATGAGGCATTGAGCCACCCATACATGGCACCTCTCCACGACATCAATGAGGAACCTGTTTGCACTAGACCCTTCAGTTTTGACTTTGAGCAACCGTCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTCTTCCACCAGTCTACTGA 1155 0.4113 MSGVESDHNNIKGVPTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETGEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHANIMSIRDIIRPPQKENFNDVYLVSELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVDLEVGSTCKLEFQLLQLYAIVNYLLLKPNTAMTILISFKKLIGSPDDASLGFLRSDNARRYVKQLPQYPKQNFSARFPIMSPGAVDLLEKMLIFDPNRRITVDEALSHPYMAPLHDINEEPVCTRPFSFDFEQPSFTEEDIKELIWRESVKFNPLPPVY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00631 384 FunFam Mitogen-activated protein kinase 23 132 - -
Vian9g00631 384 ProSiteProfiles Protein kinase domain profile. 38 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00631 384 FunFam Mitogen-activated protein kinase 122 363 - -
Vian9g00631 384 SUPERFAMILY Protein kinase-like (PK-like) 41 343 IPR011009 -
Vian9g00631 384 SMART serkin_6 38 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00631 384 Pfam Protein kinase domain 42 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00631 384 Gene3D Transferase(Phosphotransferase) domain 1 122 363 - -
Vian9g00631 384 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vian9g00631 384 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Vian9g00631 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Vian9g00631 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 337 - -
Vian9g00631 384 Gene3D Phosphorylase Kinase; domain 1 21 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00631 Vian-Chr9 7714350 7719098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00631 3 379 MAP Kinase Gene Family AT4G01370 78.249 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vian9g00631 Pkinase 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00631 K20600 - gmx:100779469 676.011