Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00612 ATGCAAAACCCTTTGGAGCCTCAAGGCTTGCATGATGACATAGACTGGGTTAGCCTTTTCTCTAGCCAAAACAGTTTCCTTGGGAATGCCAAGCCCACGATGGAATACGCTTCTTCTTCGTCTTCATCTTCCTCGTCTTCATCATCCTTGTCGTGTGCTTTGATCGCAGAAAACGGTGCTCACGTGGATGAAAAGAATGATAAAGAAAAAAGGAAAGGAAGCAGAGGGAAGAAGACAACACGACCCAGATTTGCGTTTCAGACTAGAAGTGCAGATGATATTCTGGATGATGGTTATCGCTGGAGGAAGTATGGGCAGAAAGCTGTGAAGAACAACATGCATCCCAGGTTTGTGATAAACTAA 363 0.4463 MQNPLEPQGLHDDIDWVSLFSSQNSFLGNAKPTMEYASSSSSSSSSSSSLSCALIAENGAHVDEKNDKEKRKGSRGKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRFVIN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00612 120 SUPERFAMILY WRKY DNA-binding domain 88 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00612 120 SMART WRKY_cls 95 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00612 120 Pfam WRKY DNA -binding domain 96 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00612 120 Gene3D WRKY domain 82 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00612 120 ProSiteProfiles WRKY domain profile. 90 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00612 120 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 116 IPR044810 GO:0003700
Vian9g00612 120 MobiDBLite consensus disorder prediction 57 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00612 Vian-Chr9 7307012 7307374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00612 74 116 WRKY Transcription Factor Family AT2G46130 69.767 1.57e-17 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian9g00612 WRKY 1.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00612 - - gmx:100810669 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00612 9 7307012 7307374 Vian9g00612 9 7307012 7307374 ECH
Vian2g00564 2 6847811 6848455 Vian9g00612 9 7307012 7307374 PCT