Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00581 ATGGGAAACAGTGAGGAAGGGAAATCTGTTCAAACTGGAAGTCCTTCTTCACCAGCAACAACTGATCAGGCCAATCAGACATATCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCTCCATACTTCAACTCAACTGTGGCTTCTGGTCATGCTCCACACCCATTCATGTGGGGTCCGCCACAGCCTATGATGCCACCTTATGGGCCACCATATGCAGCATTTTATCCTCCTGGTGGAGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACACGGCCAGGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCGACAAAATTATCCGGAAATACCGATCAGGGGTTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCAGAGAGTGCTGAGCTTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGGTGTTGATAAGTTGATATTTGGATCTTCGAAAATAATTGTGCCTACTACCCCAGCTAGTATTGCAGGAAAGTTTGTAGGTCCTGTAATTTCTTCAGGTATGACCACAGCATTGGAGCTTAGGAACTCTTTGACTGTTCATTCTAAGGAAAATCTCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGATACAGAATGAGCGTGAGTTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGACTGAGGAAGCAGGCCGAGACTGAAGAATTGGCCCGAAAAGTTGAGATGTTAACTGCTGAAAATGTGTCACTGAAGTCAGAAATAACTAAATTGACTGAAGGTTCAGAGCAGATGAGGATGGAAAATTCTGCAATGAGGGAAAAACTGATAAATACTCACCTGGGACAAAGGGAAGAGATAATTTTGGAAAGCATTGACAGCAAGAGGTCTACACCAGTAAGTACTGAGAACCTGCTATCAAGAGTTAATAATTCCAGTTCTAACGATAGAAGTGCAGACAATGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1203 0.453 MGNSEEGKSVQTGSPSSPATTDQANQTYQPNIHVYPDWAAMQYYGPRVNIPPYFNSTVASGHAPHPFMWGPPQPMMPPYGPPYAAFYPPGGVYTHPAVAIGPHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGGVDKLIFGSSKIIVPTTPASIAGKFVGPVISSGMTTALELRNSLTVHSKENLTSAPQPCAAVPPEAWIQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMENSAMREKLINTHLGQREEIILESIDSKRSTPVSTENLLSRVNNSSSNDRSADNESDFCENKPNSGAKLHQLLDTNPRADAVAAG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00581 400 MobiDBLite consensus disorder prediction 343 384 - -
Vian9g00581 400 Coils Coil 282 302 - -
Vian9g00581 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Vian9g00581 400 Gene3D - 258 311 - -
Vian9g00581 400 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Vian9g00581 400 FunFam G-box binding factor 3 258 313 - -
Vian9g00581 400 MobiDBLite consensus disorder prediction 113 132 - -
Vian9g00581 400 Pfam Disordered region downstream of MFMR 132 185 - -
Vian9g00581 400 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Vian9g00581 400 MobiDBLite consensus disorder prediction 101 134 - -
Vian9g00581 400 SUPERFAMILY Leucine zipper domain 258 313 IPR046347 GO:0003700|GO:0006355
Vian9g00581 400 Pfam bZIP transcription factor 255 317 IPR004827 GO:0003700|GO:0006355
Vian9g00581 400 CDD bZIP_plant_GBF1 260 308 IPR045314 GO:0003700|GO:0006355
Vian9g00581 400 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Vian9g00581 400 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 368 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vian9g00581 400 MobiDBLite consensus disorder prediction 163 181 - -
Vian9g00581 400 MobiDBLite consensus disorder prediction 163 182 - -
Vian9g00581 400 MobiDBLite consensus disorder prediction 1 28 - -
Vian9g00581 400 MobiDBLite consensus disorder prediction 343 367 - -
Vian9g00581 400 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00581 Vian-Chr9 6800724 6803600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00581 1 400 bZIP Transcription Factor Family AT2G46270 49.512 2.42e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian9g00581 MFMR 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00581 K09060 - gmx:547789 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00581 9 6800724 6803600 Vian9g00581 9 6800724 6803600 ECH