Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00571 ATGAACTCTCAGTCACAACAACAGCAACAAGGCAAACAGAAAAACCGAGAAGAGGAGGAAGAAGAAAACCATTTGTTACATTCAGAATGCGAGTCAATACCGTTGTCTTCACCCCATGTATTACCCTCAAACTGGGAACATGCAGACAAAGAAGAAGAAGAAGAAGAGAAAGACTCCGTGTATGCAGCCAAGGACAAGGTGCAGATATTTGACTTGGAGTCTTCCGGCGCAGCAGGGTCCACGGCGGTGCCGCCGTTTTCGTGGAGGAAGCTGTGGCTGTTCACAGGGCCAGGGTTGTTGATGAGCGTGGCGTTTTTGGACCCGGGGAACCTCGAAGGGGATCTTCAAGCTGGTGCGATTGCAGGTTACTCCTTGCTTTGGTTGTTGATGTGGTCCACCATCATGGGGTTGGTGATACAACTTCTGTCGGCGAGGCTCGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCAGGGAGGAGTACTCCAATTGGGCAAGGTTGGTTCTGTGGATCTTGGCTGAGATGGCTCTCATTGCTGCTGATATTCAGGAGTTGGAAGGAGTTTTCGCAGTTTTCATTGGCACTATGGGCCTTTCTTTTGCGTGGATGTTCTTTGATACAAACCCCAGTGAAGAAGAACTAATGATGGGTCTTTTAATCCCAAGACTGAGTTCAAAAACTCTTCGCCAGGCTGTGGAAATTGTGGGGTGTGTGATAACCCCACATAATGTGTTCCTCCATTCTGCATTGGTACAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTCTCAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAGTCACACTGTTGATCAATCTATCTGTAATAACAGTTTTTGCTAGAGTGTTCTATGGTACAGAACAGGCCAATGGCATAGGATTGGTAAATGCAGGGCAATATCTTGAGGAAAGGTATGGGGGAGGGTTGTTTCCAATTCTCTACATATGGGGTATTGGTTTATTAGCAGCTGGCCAAAGTAGTACCATAACTGGCACGTATGCTGGCCAGTTTATAACAGAGGGTTTTCTTAAGCTCAACATAAAGAAGTGGTTGAGGGCATTGATTACCAGAAGTTGTGCAATTGTTCCAACTATGATTTGTGCTATTGTTTTTAATACATCAGAAAGTTCATTGGACACCTTGAATGAATGGCTTAATGTGGTCCAGGCAATACAGATTCCTTTTGCTCTTATCCCCCTTCTCACTTTGGTGTCCAAAGAGGAGGTGATGGGAACCTTCAGAATAGGGCCTATAGTAGAGAAAGTGGCTTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATATATGTTATTAGATTTCTTCCTGGAAGAAGTAGATGGAGTATTGTTTGGTTTTGTGGTCTGCCTTGGTGCTGCAGCATGGATTTCATTTATTGTATATTTGGTTCAACACAGTGGTGCCATTCCTTCACTCATGACCAGGTCCCCTAATTCAAGAGGTGAAGAATGGAGATGCTTGCTTGATCTGCTGGAGAAGATGAACGAAGCGAAATCGTGGTTGCTCTGCCGGAGAAGATGA 1587 0.4594 MNSQSQQQQQGKQKNREEEEEENHLLHSECESIPLSSPHVLPSNWEHADKEEEEEEKDSVYAAKDKVQIFDLESSGAAGSTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYSNWARLVLWILAEMALIAADIQELEGVFAVFIGTMGLSFAWMFFDTNPSEEELMMGLLIPRLSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSVALLVTLLINLSVITVFARVFYGTEQANGIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIVFNTSESSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVEKVAWSVAVLVILVYGYMLLDFFLEEVDGVLFGFVVCLGAAAWISFIVYLVQHSGAIPSLMTRSPNSRGEEWRCLLDLLEKMNEAKSWLLCRRR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00571 528 MobiDBLite consensus disorder prediction 1 58 - -
Vian9g00571 528 PRINTS Natural resistance-associated macrophage protein signature 183 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 PRINTS Natural resistance-associated macrophage protein signature 401 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 185 486 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 Pfam Natural resistance-associated macrophage protein 184 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vian9g00571 528 Coils Coil 1 22 - -
Vian9g00571 528 NCBIfam Nramp family divalent metal transporter 96 189 - -
Vian9g00571 528 MobiDBLite consensus disorder prediction 12 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00571 Vian-Chr9 6636678 6643930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00571 54 488 Inorganic Solute Cotransporters AT1G47240 66.806 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00571 K21398 - gmx:100801411 860.136