Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00555 ATGGAGGCTCTCAATGCTGCAGCTTTGACCCCTCTGTCTGTGCTTTCTGATACAAAGACAACAAGAAAACAACCTCCAGTTTCTTCATGCAAAGCTTCAAGCTTTTCCACCTTTACCGACAAGAAACCAACGTTGCTGCAAAGTTGCTTATCAAAAAGTCTTCATGGAGGATTGTTTCTTGCAGCTTCAATTATGAGTGGTGATGTTGCCTCAGCTTTGACGTACGAGGAGGCACTGGGGCAAACTTTGAGTCTCCCCGGTACTGGAGACTTTGATGTGAACGGTTTTGTGGAGAGTGCTACTGGCTTTGCAACTGAGAACCCTGTAATTGTTGCTGGGGGAGTGGCCATTCTGGCACTGCCATTGGTTTTGTCTCAGGTTTTTAAGAAGCCTAAGGCGTGGGGTGTTGAGTCTGCTAAGAATGCATATGCAAAACTTGGGGCTGATGAGAATGCTCAGTTGCTTGATATCAGAGCTCTAGTGGAGATTAGGCAAGTGGGGTTCCCAGATGTTGGGGGTCTGAGGAAGAAGGCAGTGTCGATTGCTTATAAGGGTGATGATAAGCCAGGGTTCCTTAAGAAGCTTGCATTGAAGTTTAAGGAACCACAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACTGTTAATGGATTTAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCGAGAGGATGGAAGAGTAGTGGTCTTCCTTGGTTAGCACCAAAGAAGACATTGAGTTTGGATAATCTCACGGATGCTATATCTGAAGTAATTGGAGATTCATCTGATGGTGTTGCAGTTACTCTTGGGATTGCTGCAGCAGCTGCTGGACTGAGCCTGTTAGCTTTTTCTGAGATAGAATCAATTCTCCAAGTTGTAGGATCAGCTGCACTTGTTCAATTTGCAAGCAAGAAGCTTTTATTTGCTGAGGACCGAAAGCAAACCGTGAAACAACTTGATGAGTTCTTGAACACCAAAGTTGCCCCTAAAGAACTTGTTGATGAAATAAAGGACATTGGAAAGGCTCTTCTGCCAGCCTCTACCAGTAAGGCTCTTCCTGCTCCAGCAGACAAAAGTTCTGAGCTTGCTACAGCTGACAGCACTGCACAGACAGCAGTAGCTACTCCAGTGACCAATGATGCAGTAGCTCCTGCAGTAAACTCAGTGCCCAAAGCTGAAATCAAGGAAGAATCACTTCCTGTGCCACCAAGGCCACTTTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTACCCCATCACAGCCCTAG 1323 0.4543 MEALNAAALTPLSVLSDTKTTRKQPPVSSCKASSFSTFTDKKPTLLQSCLSKSLHGGLFLAASIMSGDVASALTYEEALGQTLSLPGTGDFDVNGFVESATGFATENPVIVAGGVAILALPLVLSQVFKKPKAWGVESAKNAYAKLGADENAQLLDIRALVEIRQVGFPDVGGLRKKAVSIAYKGDDKPGFLKKLALKFKEPQNTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWKSSGLPWLAPKKTLSLDNLTDAISEVIGDSSDGVAVTLGIAAAAAGLSLLAFSEIESILQVVGSAALVQFASKKLLFAEDRKQTVKQLDEFLNTKVAPKELVDEIKDIGKALLPASTSKALPAPADKSSELATADSTAQTAVATPVTNDAVAPAVNSVPKAEIKEESLPVPPRPLSPYPYYPDFKPPTSPTPSQP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00555 440 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 136 253 IPR036873 -
Vian9g00555 440 MobiDBLite consensus disorder prediction 402 440 - -
Vian9g00555 440 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 132 263 - -
Vian9g00555 440 Gene3D - 133 263 IPR036873 -
Vian9g00555 440 MobiDBLite consensus disorder prediction 415 440 - -
Vian9g00555 440 ProSiteProfiles Rhodanese domain profile. 148 254 IPR001763 -
Vian9g00555 440 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 440 IPR044240 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00555 1 430 Sulfurtransferasese or Rhodanese AT4G01050 55.745 2.38e-150 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00555 K17525 - gmx:100810796 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00555 9 6355009 6359294 Vian9g00555 9 6355009 6359294 ECH