Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00528 ATGGGGTATTTCGAATTCCTAATGGACCAACCGCCGCACCACCACAGCAGCGCCGCCACTACCTCCGCCGATAAGCCCGCCACGCAGCGAGGCGGCACGCGTCACCCGCTCTTCCGCGGCGTCCGCAAGCGCCGCTGGGGAAAATGGGTGTCCGAAATCCGGGAGCCGCGCAAGAAGTCGCGCATATGGCTCGGCTCCTTCCCGGCACCGGAGATGGCGGCGAAGGCCTACGATGTCGCAGCCTACTGCCTCAAGGGCCGCAAGGCGCAGCTCAATTTCCCCGACGAGGTCCACCGCCTCCCGCCGCTCCCTTCCGCCTGCACCGCCCGCGACATCCAGGCCGCCGCCGCCAAGGCGGCCCACATGATGATAGTCCAGGCCGCCGCCGACGCCCCCGACTCCCCGGAGAAGAGCAGCATTACCTCCGGCTGCGGCCACGCAGCCGATGACTTCTGGCGAGAAATTGAGCTGCCGGAGCTCCTCCACAGCAAGTGGTGGACCTCTTCCGCCGACTCGTCGCCATGGACGGAGGATGACCTCCAGCCGCAGCAACCCTTCACCACGGCGTGCTTGTAG 576 0.6719 MGYFEFLMDQPPHHHSSAATTSADKPATQRGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPSACTARDIQAAAAKAAHMMIVQAAADAPDSPEKSSITSGCGHAADDFWREIELPELLHSKWWTSSADSSPWTEDDLQPQQPFTTACL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00528 191 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Vian9g00528 191 MobiDBLite consensus disorder prediction 172 191 - -
Vian9g00528 191 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Vian9g00528 191 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Vian9g00528 191 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Vian9g00528 191 CDD AP2 36 95 IPR001471 GO:0003700|GO:0006355
Vian9g00528 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 164 - -
Vian9g00528 191 MobiDBLite consensus disorder prediction 14 28 - -
Vian9g00528 191 MobiDBLite consensus disorder prediction 11 35 - -
Vian9g00528 191 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Vian9g00528 191 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Vian9g00528 191 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Vian9g00528 191 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00528 Vian-Chr9 5814103 5814893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00528 9 191 AP2-EREBP Transcription Factor Family AT1G01250 53.191 6.60e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian9g00528 AP2 8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00528 K09286 - gmx:100802845 287.73