Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00510 ATGAATTCTGGTGCTGTCTTGACACTGCCTCCCGTGTGCAATGCGTTCGGGACCAGGGAGCCTCAGGATTTTGAGGACGAGTTTGCGGAGAAAGATCCAACCGGGCGGTATACAAGGTATACTGAAGTCTTGGGAAGGGGTGCCTTCAAAACTGTTTATAGGGCCTTTGATGAAGTTGATGGAATTGAAGTTGCTTGGAATCAAGTTAAGATTGATGGCCTCTTGCATTCAGTAGATGATCTTGCGAAATTGTATTCTGAAGTTAATCTTTTGAAGTCTTTGAAACATGACAATATCATTAAGTTCTGTGATTCTTGGATTGATGATAAGGAGAAAACTGTTAACATGATTACTGAACTGTTCACATCAGGAAATTTAAGGCAATATCGCAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATTCTTCATGGCTTACTATATCTTCATAGTCACAAGCCACCCATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAGGGTGAAGTTAAGATAGGGGATCTTGGTTTGGCAATTGTCATGCAGCAACCTACCGCCCGAAGTGTTATTGGAACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGTCATACACAGAACTGGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTCACTTTTGAGTATCCCTATGCCGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTCAGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGATCCTCAAATTAGGGAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTGAAAGATCCATTTCTACAAGTTGAGAATTCAAAGGATCCCGTCCTTTATCCTTTACAACCACCTAGAAGAACTCTGAGAGCGTACTCATTCAAGTCTAGTTCTCATTCTATGGACTTGGATGGTGACTACAAACAGTTTTCTATGAGTATCTGTTCCGAAAGCAACCAAGAAAGCCCATATTGTCCTGTTTTTGAGGTTCAGAGGGCAAATATTAACAATGAGTTTAGGTTGAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGCAGGTCGAGTGAGGAACATACATTTTCTGTTTTACCTTGATTCAGATACCGCAGTCTCTGTGGCCACAGAGATGGTTGAACATTTGGAGCTGGCAGATCACGATGTACCTTTCATAGCTGAGCTTATTGATTATTTGATAATGAAACTTCTCCCTTGGTGGAATCCTTCGCATGATCGTTGGGCATGTGGTGAAATAAATCCTAATATAGATGCCCAAAACTTCATGGGATGGCCATGGGCTTCTGCCCTACCAAGTCTTCCCTCTGATTTGGCTATTGAGGAGGATGGCTACTCTGGGATTGATACAACCCCCAAAGAAGATTTTGTGGCAGCCGAGAACAGCTTAACAGAAAGTGGTGATAAGGCTACTTTCGAGGGTGATTATCATTCACAAAGATCTGAAGCTTCTGAGGTAGTTGTTGAGAATGCTTCTATGAAAGATGACAATTGTCATTATTCCAGTGTTGATGCAAGCTCTAAGTGCTTAAGTAGTAGGTCCATCTCTGAACTTGATCTTGGGGATGAATATTTTGAGGACTGTAAATTGCAACAAGAAAATTATTCTTCTGGGGAAGAAGTTGTGATAAATGAATACCCAGCGAACTCGGGGTCAGTTCTTGGAACATCTACTAATGTTGGGAGCACAAGAAGTAGCTGTTCTTATGTGTCTTCATCAGTAGAGGAGATTGATCTTGAGCTACAGCTTGAACTTGCTGTAATTGAGACTCACTATCAGCATTGGATTGATGAACTCAACAAAATGAAGTTGGAGGCATTAGAATCCACCAGAAGGAGATGGATGGCCAAGAAGAAACTGGCTGTTCGGTGA 1992 0.4116 MNSGAVLTLPPVCNAFGTREPQDFEDEFAEKDPTGRYTRYTEVLGRGAFKTVYRAFDEVDGIEVAWNQVKIDGLLHSVDDLAKLYSEVNLLKSLKHDNIIKFCDSWIDDKEKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLLYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEESYTELVDIYSFGMCILEMVTFEYPYAECKNPAQIFKKVTSGIKPASLNKVSDPQIREFIEKCLVPASERLSAEELLKDPFLQVENSKDPVLYPLQPPRRTLRAYSFKSSSHSMDLDGDYKQFSMSICSESNQESPYCPVFEVQRANINNEFRLKGTKNDDNSVSLTLRIADTCAGRVRNIHFLFYLDSDTAVSVATEMVEHLELADHDVPFIAELIDYLIMKLLPWWNPSHDRWACGEINPNIDAQNFMGWPWASALPSLPSDLAIEEDGYSGIDTTPKEDFVAAENSLTESGDKATFEGDYHSQRSEASEVVVENASMKDDNCHYSSVDASSKCLSSRSISELDLGDEYFEDCKLQQENYSSGEEVVINEYPANSGSVLGTSTNVGSTRSSCSYVSSSVEEIDLELQLELAVIETHYQHWIDELNKMKLEALESTRRRWMAKKKLAVR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00510 663 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Vian9g00510 663 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00510 663 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 540 - -
Vian9g00510 663 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Vian9g00510 663 CDD STKc_WNK 36 295 - -
Vian9g00510 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Vian9g00510 663 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00510 663 FunFam probable serine/threonine-protein kinase WNK9 121 300 - -
Vian9g00510 663 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00510 663 SUPERFAMILY Protein kinase-like (PK-like) 40 351 IPR011009 -
Vian9g00510 663 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Vian9g00510 663 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 434 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00510 Vian-Chr9 5563203 5566576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00510 25 445 MAP Kinase Kinase Kinase AT5G41990 62.233 1.08e-172 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian9g00510 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00510 K08867 - gmx:100809602 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00510 9 5563203 5566576 Vian9g00510 9 5563203 5566576 ECH