Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00493 ATGACCTCCTGTAACTGGTTACGCGTTTGTGTAACCGGTTACGCGTTGTATGAAAGCACAGAATGGAAAACTGGTCAAGTGATGAAGGCCACTCTACTTCCAGATTCAGAAAACCTTTGTTGTGTTGGGATGTGTGAGAGTGAAGAAAACAACTTGGGAGAAGTTGCGGAGACCAATCTTCCATGCCTGGATCACCCGCAGAGAAAGAAGGTGGTGATTGAAGATATTCCAAAAGGGTTTTTGCCGATCAAGGTAGGGCAAGGTGAAGAGCAAGAGAAAATCGTGATGCCTGTGATGTACCTCAACCATCCTTTGTTTTCTCAGCTACTGAAAGAGGCAGAAGAAGAGTATGGTTTTGATCAGCAAGGAACCATAATCATTCCTTGCCATCTCAAGGACTTTAGGTACGTTCAAGACCTCATTCACAAGGACATATCCCACCAACATCAACACCAACACCATGTCGTTAGATGTTTTAGGTCTCCATGA 489 0.4438 MTSCNWLRVCVTGYALYESTEWKTGQVMKATLLPDSENLCCVGMCESEENNLGEVAETNLPCLDHPQRKKVVIEDIPKGFLPIKVGQGEEQEKIVMPVMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHLKDFRYVQDLIHKDISHQHQHQHHVVRCFRSP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00493 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 136 IPR003676 GO:0009733
Vian9g00493 162 Pfam Auxin responsive protein 72 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00493 Vian-Chr9 5257939 5259131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00493 75 137 Calmodulin-binding Proteins AT3G43120 46.032 1.31e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00493 K14488 - pvu:PHAVU_010G117400g 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01090 6 28290056 28290824 Vian9g00493 9 5257939 5259131 PCT