Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00492 ATGTCCAACGATCCAAGGTCTCTGAGTTACTCCTTTCTAACTCACTTCAACATGGCGATGGCAGACCCAGAACCTTGGTCGTTCCTCACCCTCAAAATGGGCATGGGGGAGAAGAGTCCAAGGAGTTTCCAATTGCACCATCGTGATGGGAAGAAGCAAGAGTTCAGAGGGGTGCCAAAAGGGTGCATGGCAATTAAGGTTGGTCAAGGAGAAGAGCAACAAAGGTTCGTGGTTCCTGTCATGTACATCAACCATCCTCTCTTCATGCAGCTTCTCAAGGAGGCAGAGGAAGAATACGGTTTCGACCAGAAGGGAACCATAACCATCCCTTGCCATGTTGAGGAATTCAGAAACGTCCGGGGTCTGATTGATAGGGACAAGTCCCTTCACCACCACCACCATGTTGGTTGCTTTGGCTTCTGA 423 0.4965 MSNDPRSLSYSFLTHFNMAMADPEPWSFLTLKMGMGEKSPRSFQLHHRDGKKQEFRGVPKGCMAIKVGQGEEQQRFVVPVMYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHVGCFGF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00492 140 Pfam Auxin responsive protein 52 119 IPR003676 GO:0009733
Vian9g00492 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00492 Vian-Chr9 5237043 5237568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00492 58 136 Calmodulin-binding Proteins AT5G20810 46.250 4.69e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00492 K14488 - gmx:111188139 204.527