Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00491 ATGGGTCAGTGCTACGGCAAGTCCAATCTCACGCCGGAAAATGAGGCTACAGCCGCAGAGGGAGCCACAGTTGGCACCGCTATCGCGGTGGCTGGATCCGCTGACGTCCCGCTCTCTCCGCTGCCGGTGAAGGGAACGCCGGCGCGGGCGAGTCCCTGGCCCAGTCCATACCCACACGGTGGCGGTGTGACGCCGTCCCCGGCCAGAGGCACGCCGAGGAGATTTTTCCGGCGGTCGTTCGCGCCGCCGTCTCCTGCGAAGCACATAAGGGCGTCGCTGGCGAAGCGGCTCGGGCACGCGAAGACACCGAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCGGGAGCGGTGGCGACGGAACAGTCGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCAAAATATGAAATTGGGAAAGAAGTGGGTCGTGGGCATTTTGGTCATACTTGTTATGCTAAGGGGAAGAAGGGCGAACTCAAAGACCAGCCTGTTGCTGTTAAGATCATTTCCAAGGCGAAGCGTTTGGATTTGGACGATTCGGGGTTTGATCTCTGTTGTTTGATTGAACACTCTGCGAGATTCTTGTTAAAAGCGCGTTTCTCTTTGTCTCTATTTGAGGCTGGGTTGGCCACTTTGCTGGCAGTTTTGGAAGCTAAATTTGTCTTGCATCAGATGACAACTGCAATAGCAATTGAGGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATCAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATTCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGATGAACGGCTGAATGACATTGTTGGGAGTGCTTATTATGTTGCACCTGAGGTCCTTCACCGGTCATATAGTCTGGAAGCCGATATATGGAGTATTGGTGTTATTGCCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTGCCTCTGCAGAAGCCAAGGACTTCGTGAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTGAGGGATGACAGCCGACCACTCCCTTTAGATATATTAGTTTATAAACTAGTGAAGGCTTATGTTCTTGCAACACCACTCAAACGGGCAGCAGTGAAGGCACTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTATGGCACAATTCAGATTGTTGGGACCAAACAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGCTCTTGTACAGAATGCAACTGAAGCAATGAGGGAATCAAGGGTTGTTGAGATCATAAATGCGATGGAGCCACTTGCCTATAGAAATATGGACTTTGAAGAATTTTGTGCAGCTGCAATCAGCACATATCAATTGGAAGCACATGAAAGGTGGGAAGACATTGCCTCAGCTGCATTTGAACACTTTGAGGGAGAAGGCAACCGTCTGATATCTGTTGAAGAATTGGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAACTCTGAAAGACTGGATAAGAAATAGTGATGGAAAGCTTAACTTACTTGGATATACAAAATTTTTGCATGGTGTGACTGTCCGTAGTTCAAACCCAAGACACAGGTAG 1815 0.4771 MGQCYGKSNLTPENEATAAEGATVGTAIAVAGSADVPLSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHAKTPKEGPIPEEEAAGAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKRLDLDDSGFDLCCLIEHSARFLLKARFSLSLFEAGLATLLAVLEAKFVLHQMTTAIAIEDVRREVKILKALSGHQHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDDSRPLPLDILVYKLVKAYVLATPLKRAAVKALSKALPEDELPYLMAQFRLLGPNRDGLISLDNFKMALVQNATEAMRESRVVEIINAMEPLAYRNMDFEEFCAAAISTYQLEAHERWEDIASAAFEHFEGEGNRLISVEELARELNLGPSAYSTLKDWIRNSDGKLNLLGYTKFLHGVTVRSSNPRHR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00491 604 ProSiteProfiles Protein kinase domain profile. 137 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00491 604 FunFam CDPK-related kinase 1 450 522 - -
Vian9g00491 604 Gene3D Transferase(Phosphotransferase) domain 1 216 310 - -
Vian9g00491 604 MobiDBLite consensus disorder prediction 41 87 - -
Vian9g00491 604 FunFam Calcium-dependent protein kinase SK5 324 424 - -
Vian9g00491 604 Gene3D - 433 522 - -
Vian9g00491 604 SUPERFAMILY Protein kinase-like (PK-like) 126 427 IPR011009 -
Vian9g00491 604 MobiDBLite consensus disorder prediction 98 117 - -
Vian9g00491 604 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Vian9g00491 604 Pfam Protein kinase domain 312 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00491 604 Pfam Protein kinase domain 226 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00491 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 314 579 - -
Vian9g00491 604 MobiDBLite consensus disorder prediction 47 61 - -
Vian9g00491 604 SUPERFAMILY EF-hand 441 593 IPR011992 -
Vian9g00491 604 Gene3D - 438 581 - -
Vian9g00491 604 Gene3D Transferase(Phosphotransferase) domain 1 311 426 - -
Vian9g00491 604 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00491 Vian-Chr9 5220167 5227000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00491 39 604 EF-hand Containing Proteins AT1G49580 51.680 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vian9g00491 Pkinase 6.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00491 - - gmx:100796256 918.687