Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00481 ATGGCTACCATGACTCGTTTTGTTCTATGCTTTTCCTGCATCGTTATCCTTAACCTCGTTTATACCATGGCTCAATCTGATAACTATATCATCCACATGGACAAATTAGCCATGCCGAAAGCATTTTCCACCCACCATGCTTGGTATTTGTCCACTCTTTCCTCTGTATTAGATAATGCTCATACCTTCAATGATGACAATCTTGACATTGCTTCTTCTAAACTGATTTACACCTACACCAACGCCATGAATGGTTTTACTGCAAATTTGTCACCACAGGAAATTGAAGCTCTCAAAACCTCCCCGGGCTACGTTTCTTCCACACCAGATTTGCCGACCAAGCTTGACACAACACACTCACCAGAATTCCTTGGCCTTAATCCCAACATAGGAGCTTGGCCTGCTGCGAAATTTGGTGAAGATGTCATTGTTGGTTTGGTGGACACTGGAGTATGGCCAGAAAGTGAAAGCTTCAACGATAAAGGGATGCCTGATAAGCTTCCTTCACGATGGTATGGCAATTGTGAAAGTACTATCAAATGCAACAAGAAACTCATTGGAGCTCGCTTCTTTAACAAAGGGTTTCTTGCCAAGAATTCCAAATCGGCCAAAATTGCGTCTCTTACCCTTGGCAATGGTGTCAAACTATTCGGTTTATCAACCTATCTATTAGGAAACTTCTCAGCACACCAAGTTCCTATTGTTTTTTCCGGTTCATGTGACAATTTCACGGAACTAGTCAAAGCAAGTAACAAGATTGTGGTGTGTGAGGTTATGGATGCAAATCTTCCAAATCTTGTGTATAATATAAAGGCTTCAAATGTTTCAGCATCAGTGTTCATTTCAACTTTCAACGATGTTGCAACTATTAATGAGCTTGGTCTTGTAGGCGTCGTTGTAAACCCAAGAAATGGAGAAACGATCAAAGCATACATCAAGAGTAACTCTGATGCAAAAGCAAGCATGTCTTTTCAGATAACAACATTAGGTATTAAACCTGCACCGAGAGTGGATCGTTACAGTTCTAGAGGGCCATCAATTAGTTGCCCCTTTGTGTTGAAACCAGATATCACCGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATCTTCCAGTGTCCAGTCCTGGATCAAATCCCCTTTATAGTAACTTCAATCTTTTATCTGGAACATCTATGGCATGCCCTCATATGGCAGGTGTGGCAGCATTGTTAAAAGGAGCACATCGTGATTGGAGCCCTGCAGCTATTAGGTCAGCCATCATGACAACATCGGATATATTTGACAACAATAAGGAACCCATTAAAGACATTGGTGACGGAGACAAACCAGCATCTCCTTTAGTCATGGGAGCTGGTCATGTCAACCCCAACAAAGCCCTAGACCCTGGACTTGTTTACGATGCGGGTGCTCAGGATTACGTCAATCTTCTCTGCGCAATGAACTTAACTCAACAACACATCAAAACCATCACAAGATCCTCTTCCTACAATTGTTCCAAACCTTCCTTGGATCTTAACTACCCTTCTTTCATTGCTTTGTTCAGTGAAAATGGTTCTTCTAAACAGTCAATGGGAACTTGGGATTTTTTTAGAACAGTGACCAATGTTGGGGAGGGACAAACAATCTATACTGCTAGGGTTACACCAATCAAAGGGTTCAATGTTAGCATCACCCCAAGCAAGTTGGTGTTCAAGGAGAAGAACCGGAAGCTAAATTACAAGATAAGAATTGAAGGTCCAAAGAGGGAGGGTTTCGGGTACGTCACTTGGACTGACGTGAAACATGTTGTGAGGAGTCCTATTGTGATCACCTATCCACCATCTCAACAATAA 1839 0.4214 MATMTRFVLCFSCIVILNLVYTMAQSDNYIIHMDKLAMPKAFSTHHAWYLSTLSSVLDNAHTFNDDNLDIASSKLIYTYTNAMNGFTANLSPQEIEALKTSPGYVSSTPDLPTKLDTTHSPEFLGLNPNIGAWPAAKFGEDVIVGLVDTGVWPESESFNDKGMPDKLPSRWYGNCESTIKCNKKLIGARFFNKGFLAKNSKSAKIASLTLGNGVKLFGLSTYLLGNFSAHQVPIVFSGSCDNFTELVKASNKIVVCEVMDANLPNLVYNIKASNVSASVFISTFNDVATINELGLVGVVVNPRNGETIKAYIKSNSDAKASMSFQITTLGIKPAPRVDRYSSRGPSISCPFVLKPDITAPGTSILAAWPQNLPVSSPGSNPLYSNFNLLSGTSMACPHMAGVAALLKGAHRDWSPAAIRSAIMTTSDIFDNNKEPIKDIGDGDKPASPLVMGAGHVNPNKALDPGLVYDAGAQDYVNLLCAMNLTQQHIKTITRSSSYNCSKPSLDLNYPSFIALFSENGSSKQSMGTWDFFRTVTNVGEGQTIYTARVTPIKGFNVSITPSKLVFKEKNRKLNYKIRIEGPKREGFGYVTWTDVKHVVRSPIVITYPPSQQ 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00481 612 FunFam Subtilisin-like protease SBT1.9 18 116 - -
Vian9g00481 612 Gene3D - 479 607 - -
Vian9g00481 612 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vian9g00481 612 PRINTS Subtilisin serine protease family (S8) signature 390 406 IPR015500 -
Vian9g00481 612 Pfam Fibronectin type-III domain 506 605 IPR041469 -
Vian9g00481 612 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 115 IPR037045 -
Vian9g00481 612 Gene3D - 239 329 - -
Vian9g00481 612 Gene3D Peptidase S8/S53 domain 330 475 IPR036852 GO:0004252|GO:0006508
Vian9g00481 612 Gene3D Peptidase S8/S53 domain 141 200 IPR036852 GO:0004252|GO:0006508
Vian9g00481 612 SUPERFAMILY Subtilisin-like 6 509 IPR036852 GO:0004252|GO:0006508
Vian9g00481 612 Pfam Subtilase family 319 430 IPR000209 GO:0006508|GO:0008236
Vian9g00481 612 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 207 604 IPR045051 -
Vian9g00481 612 ProSitePatterns Serine proteases, subtilase family, serine active site. 391 401 IPR023828 -
Vian9g00481 612 Pfam Peptidase inhibitor I9 29 115 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00481 Vian-Chr9 4971518 4973776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00481 206 594 Subtilisin-like Serine Gene Family AT5G67090 43.250 4.49e-87 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00481 - - gmx:100787831 567.385