Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00480 ATGGATATATCAGCCATGCCCAAAGCATTCTCCACCCAGCACACTTGGTATCAATCCACTCTTTCTTCAGCGTTGAAAAGTTCCAAACCCACCAGTAATAATCTTAAATCTATTATTTCTACCAAGCTGCTTTACACCTACACCAATGTCATCAATGGTTTCAGTGCAAACCTTTCACCTAAAGAGCTTGAAGCTCTGAAAACCTCCCCCGGTTATGTTTCTTTCTTGCGAGATTTACCAGCCAAGCGTGACACAACACACTCACCGTCCTTCCTTGGCTTAAACCCCAATGAAGGGGCGTGGCCAGCGGCACAGTTTGGCAAGGATGTCATAGTTGGTTTGGTGGACACTGGAATTTGGCCAGAAAGTGAAAGCTTCAGAGACGATGGAATGGGTGGGGTTCCTTCACGATGGAAAGGGCAATGTGAAAGTACCATCAAATGCAACAAGAAGCTCATTGGAGCAAGGTTCTTTAACAAAGGGTTGTTGGCAAAGAACCCCAACATCACCATAGGTGCGAACTCAACACGTGACACTGAGGGTCATGGAACTCATACATCAAGCACTGCAGCTGGGAGCGTAGTCGAAGGTGCATCGTACTTTGGGTATGCTTCTGGAACAGCCACGGGAATGGCTTCACGTGCGAGAGTGGCCATGTACAAAGCCCTGTGGGAAGATGGAGCTTACATGTCTGATATAATAGCCGCAATTGATAGTGCGATATCTGATGGGGTAGATGTTCTTTCTTTGTCATTTGGCTTTGATGATATACCTTTGTACGAGGACCCTGTTGCTATAGCCACGTTTGCAGCAATGCAGAAAAACATTTTTGTGTCGACGTCAGCAGGGAACGAAGGGCCTTCCCTTGGAAGACTTCACAACGGAATACCATGGGTCATAACTGTGGCTGCCGGAACTTTGGACCGTGAATTTCACGGGGCTCTTACTCTTGGCAATGGAGTCCAACTAACTGGCATGTCTCTCTATCATGGAAACTTCTCCTCTAGCCATGTTCCAATTGTTTTCATGGGGTTGTGCGACAGAGTGAAGGAACTGGCCAAAGTGAGGACCAAGATTGTGGTGTGTGAAGACAATGGAACAATCATTGATCTTCAAGTGTCTAACATTTTTGAAGCAAATGTTGTCGCGGCAGTGTTCATAACAAACAGTTCCGATAGTTCGTTTTTCTTAGATAATAGCTTTGCAACAATTGTTATTTCCACAGCAGATGGGGAAATTGTCAAAGCTTACATCAAGAGCAATAACTCTAGTGCGAAAGCAAGCATGTCTTTTGAGATGACAGTTTTGGGTACTAAACCAGCACCGAGTGTGGATAGTTACAGTTCCCGAGGACCTTCAAGTAGTTGTCCATTTGTGTTGAAACCGGACATCACTGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATCTTCCGGTGGAAGTGTTTGGGTCGCAAAGTATTTTCAGTAACTTCAATTTGTTAAGTGGCACATCCATGGCATGCCCTCATGTTGCTGGTGTCGCAGCATTGTTAAGAGGAGCACACCCCGAATGGAGTGTTGCATCCATTAGGTCAGCCATCATGACAACATCAGACATGGTTGATAACACCTTAGGGCCCATCAAAGACATTGGCAACGACAACAAACGAGCCACTCCTTTAGCATCTGGTTCTGGTCACATCAACCCTAATAAAGCCCTTAACCCTGGCCTTGTTTACGATGCTGGAGTTCAAGATTATGTTAATCTGCTCTGCGCTCTTGGCTTCACCCAAAGAAACATCACCGTCATCACAAGAACCTCTTCCAATGATTGTTCCAAAGCTTCCTTGGACCTCAACTACCCTTCTTTTATTGCTTTCTTCAACAGCAACAATTCAAGTACAGCACAAGAATTTCAGAGAACAGTGACCCATGTAGGGGAGGGACCTGCAAGCTATGCTGCCAGCTTTATACCCGTGGAAGGGTACGAAGTCAGTGTGATCCCTGAATTGTTAGTGTTCAAGGAGAAGTACGAGAAGTTGAACTACACGTTGAGAATTGAAGGTCCACGAAAGAAGAAAGAGAAGAAAGTTGCTTTTGGGTATCTCATTTGGACGGACATCCAACATGTGGTTAGGAGTCCCATTGTGGTCACCACTCTCAAATTCGACTTCTAA 2163 0.454 MDISAMPKAFSTQHTWYQSTLSSALKSSKPTSNNLKSIISTKLLYTYTNVINGFSANLSPKELEALKTSPGYVSFLRDLPAKRDTTHSPSFLGLNPNEGAWPAAQFGKDVIVGLVDTGIWPESESFRDDGMGGVPSRWKGQCESTIKCNKKLIGARFFNKGLLAKNPNITIGANSTRDTEGHGTHTSSTAAGSVVEGASYFGYASGTATGMASRARVAMYKALWEDGAYMSDIIAAIDSAISDGVDVLSLSFGFDDIPLYEDPVAIATFAAMQKNIFVSTSAGNEGPSLGRLHNGIPWVITVAAGTLDREFHGALTLGNGVQLTGMSLYHGNFSSSHVPIVFMGLCDRVKELAKVRTKIVVCEDNGTIIDLQVSNIFEANVVAAVFITNSSDSSFFLDNSFATIVISTADGEIVKAYIKSNNSSAKASMSFEMTVLGTKPAPSVDSYSSRGPSSSCPFVLKPDITAPGTSILAAWPQNLPVEVFGSQSIFSNFNLLSGTSMACPHVAGVAALLRGAHPEWSVASIRSAIMTTSDMVDNTLGPIKDIGNDNKRATPLASGSGHINPNKALNPGLVYDAGVQDYVNLLCALGFTQRNITVITRTSSNDCSKASLDLNYPSFIAFFNSNNSSTAQEFQRTVTHVGEGPASYAASFIPVEGYEVSVIPELLVFKEKYEKLNYTLRIEGPRKKKEKKVAFGYLIWTDIQHVVRSPIVVTTLKFDF 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00480 720 Gene3D - 308 436 - -
Vian9g00480 720 SUPERFAMILY Subtilisin-like 84 573 IPR036852 GO:0004252|GO:0006508
Vian9g00480 720 CDD PA_subtilisin_like 315 425 - -
Vian9g00480 720 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Vian9g00480 720 CDD Peptidases_S8_3 84 534 IPR034197 -
Vian9g00480 720 Gene3D Peptidase S8/S53 domain 109 582 IPR036852 GO:0004252|GO:0006508
Vian9g00480 720 ProSiteProfiles Serine proteases, subtilase domain profile. 88 569 - -
Vian9g00480 720 FunFam Subtilisin-like protease SBT1.5 109 316 - -
Vian9g00480 720 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Vian9g00480 720 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 713 IPR045051 -
Vian9g00480 720 PRINTS Subtilisin serine protease family (S8) signature 178 191 IPR015500 -
Vian9g00480 720 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Vian9g00480 720 PRINTS Subtilisin serine protease family (S8) signature 107 126 IPR015500 -
Vian9g00480 720 Pfam Subtilase family 107 538 IPR000209 GO:0006508|GO:0008236
Vian9g00480 720 Pfam Peptidase inhibitor I9 7 80 IPR010259 -
Vian9g00480 720 Pfam Fibronectin type-III domain 613 713 IPR041469 -
Vian9g00480 720 Gene3D - 586 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00480 Vian-Chr9 4954083 4956245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00480 1 702 Subtilisin-like Serine Gene Family AT5G67090 47.157 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00480 - - gmx:100783026 1133.63