Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00472 ATGGAAGCACAAAGCTCTCAGCAAACGCAAGTTATTGAGATCAGTGGAGATTTTCCTGATGGCGGAAGAAAGATTTGTGGGGAAGCACCATGTGGGTTTGCAGATGTCGGATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTGTGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAAATTCTTGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGTCCTAAAAGTGTGGATGGTTTCTTAATGTTTTTAGTTTCCGCATTTGGTCTTGTGGTTAATATCATCATGGCCTTGTTATTGGGTCATGATCATGGCCACGGTCATGGACACGGTCACGGACACGGACATGATGGTCACAGACATGGACATGGCCACAGTCATGGATTTACAGTTTCTACCCATCATGATGCAAGACATGCAAAAGATGAGCACCATCACACACATGATCACACAGACGATCACGATGATCATCATTCAAAAGATGAGCACCATCATGATCACCAAGAGCTTACTCAATCTCTTCTTGATGAATCAAAAACTAAGAAGAAGAAGCAAAGGAACATAAATGTACAGGGAGCTTATCTCCATGTCCTTGGAGACTCTATCCAGAGTATTGGAGTAATGATTGGGGGAGCGGTAATATGGTATAAACCTGAGTGGCAAATAGTTGATTTAATTTGCACTCTGATATTTTCGGTAATAGTTTTGGTGACAACTATCAATATGCTGCGAAATATTTTGGAAGTTCTGATGGAGAGCACGCCTCGTGAGATAGATGCTACTAAGCTAGAAAGGGGGCTGTTGGATATGGAAGACGTGGTGGCTGTTCATGAACTGCACATATGGGCCATTACAGTCGGAAAGGTTTTACTGGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGATTATATCAAACGGGTCTATAACATCAGTCATGTAACCATACAAATAGAGCGTTAG 1215 0.4222 MEAQSSQQTQVIEISGDFPDGGRKICGEAPCGFADVGSISKDSEERSTSMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHGHGHGHGHDGHRHGHGHSHGFTVSTHHDARHAKDEHHHTHDHTDDHDDHHSKDEHHHDHQELTQSLLDESKTKKKKQRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00472 404 NCBIfam cation diffusion facilitator family transporter 50 404 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vian9g00472 404 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 332 403 IPR036837 -
Vian9g00472 404 MobiDBLite consensus disorder prediction 182 203 - -
Vian9g00472 404 MobiDBLite consensus disorder prediction 204 259 - -
Vian9g00472 404 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 327 IPR027469 -
Vian9g00472 404 Pfam Cation efflux family 53 326 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vian9g00472 404 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 404 - -
Vian9g00472 404 Gene3D Cation efflux protein transmembrane domain 49 325 IPR027469 -
Vian9g00472 404 MobiDBLite consensus disorder prediction 181 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00472 Vian-Chr9 4800503 4801717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00472 1 404 Inorganic Solute Cotransporters AT2G46800 69.007 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00472 K14689 - gmx:100794876 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00472 9 4800503 4801717 Vian9g00472 9 4800503 4801717 ECH