Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00469 ATGGCAAAAGCAGGTGAAGGTGCCAAGCTCTCAGCAGAAGAGATTACAGAAAAAGTTGGCATAAAGAATCCACAAGCACCGACTATGGTGGATCGGATTCTGAGGCTGTTGGCAAGTCACTCCATGTTATCTTCATGTTTTGGTGAAGAGGGCCAAAATTCTGGCAAGAGGCTATATAGTCTCACCTATGCATCCAAGTACTTTGTTTCTGATGCTGATGGTGTCTCGTTCGGAGCTTCCTTGAACTTGATTCTTGGCAAGGTCTTCTTGGATAGCTGGACTGAACTGAAAGGAGCCATCGCGGAAGGTGGCATAGCATTCGACAGGGTTTATGGGATGAACCCGTTTGAGTATCAAGCTGTGGATCCTACGTACAATGATGTTTTCAACAAAGCTATGTTCAACATTACCACCATAATCACAAACAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAACAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTAAAACTAATCACTTCTAAATATCCCAATGTTCAAGGTGTTAATTTTGACTTGCCACACGTCATACAACATGCCCCTACCTTCCCTGGTGTGGAACATGTAGCAGGAGATATGTTTGAGAGTGTTCCTAATGGAGACGCCATTTTTATGAAGTGGATACTTCATGATTGGGGTGATGAAGAGTGTTTGAAGTTGCTGAAGAACTGCTACAAAGCTATTCCCAGTGATGGAAAAGTGATTGTTGTGGATTTGATTGTTCCTGCTTTGCCGGATAGTACAGTTATTGCGAGGAATGGTTTTCAAGCTGACCTATTGATGATGGCTCAAAATCCAGGAGGGAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTATCTTCTGGATTCAGTGGCATCAGATTCGTCTGCTTTGTCTCTGGCTTCTGGATTATGGAGTTTTTCAAGTAG 951 0.4322 MAKAGEGAKLSAEEITEKVGIKNPQAPTMVDRILRLLASHSMLSSCFGEEGQNSGKRLYSLTYASKYFVSDADGVSFGASLNLILGKVFLDSWTELKGAIAEGGIAFDRVYGMNPFEYQAVDPTYNDVFNKAMFNITTIITNRVLELYDGFKNINRLVDVGGGLGINLKLITSKYPNVQGVNFDLPHVIQHAPTFPGVEHVAGDMFESVPNGDAIFMKWILHDWGDEECLKLLKNCYKAIPSDGKVIVVDLIVPALPDSTVIARNGFQADLLMMAQNPGGKERTQNEFMELALSSGFSGIRFVCFVSGFWIMEFFK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00469 316 SUPERFAMILY "Winged helix" DNA-binding domain 1 71 IPR036390 -
Vian9g00469 316 PIRSF O-mtase 1 316 IPR016461 GO:0008168
Vian9g00469 316 Pfam Dimerisation domain 1 38 IPR012967 GO:0046983
Vian9g00469 316 Gene3D - 1 144 IPR036388 -
Vian9g00469 316 FunFam Caffeic acid O-methyltransferase 69 316 - -
Vian9g00469 316 CDD AdoMet_MTases 156 253 - -
Vian9g00469 316 Gene3D Vaccinia Virus protein VP39 126 305 IPR029063 -
Vian9g00469 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 314 IPR029063 -
Vian9g00469 316 PANTHER O-METHYLTRANSFERASE 8 302 IPR016461 GO:0008168
Vian9g00469 316 Pfam O-methyltransferase domain 93 298 IPR001077 GO:0008171
Vian9g00469 316 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 316 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00469 Vian-Chr9 4763202 4765687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00469 4 316 Monolignol Biosynthesis Gene Families AT5G54160 51.438 5.52e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00469 K13066 - var:108346436 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00469 9 4763202 4765687 Vian9g00469 9 4763202 4765687 ECH