Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00468 ATGGCTCCCCCAAACGAAACCGATAACGGTGAAGCCAAGCAACTTCAACACGTTGAAGAAGAGCAAGATGGTCTCCTCTTTGCCCTGAACATGGTGTCTAGTGTGGCGTTCCCTCTTGGGGTTAATACAGCGAATGAGCTCGGTATCTTTGACATCATGGCCAAAGCAGGTGCAGATGCGAAGCTCTCAGCAGAAGAGATTACAGAAAAAGTTGGCATAAAGAATCCACAAGCACCGACTATGGTGGATCGGATTCTGAGGCTGTTGGCAAGTCACTCCATGTTATCTTCATGTCTTGGTGAAGAGGGCCAAAATTCTTGCAAGAGGCTCTATAGTCTCACCTATGCATCCAAGTACTTTGTTTCTGATGCTGATGGTGTCTCATTCGGAGCTTCCTTGAATTTGATTCTGGGAAAGGTCTTCATGGATAGCTGGACAGAACTGAAAGGAGCCATCGCGGAAGGTGGCATAGCATTCAACAGGATTTATGGGATGAACATATTTGAGTATTCCGCTGTGGATCCTACGTTCAATTATGGCTTGAACAAAGTTATGTTCAACACTACAACCATAGTCACAAACAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAACAGGCTTGTGGATGTTGGTGGTGGGTGGGCTTGTGTGTGCGGAAATTTTCAGTGGATACTTCACGATTGGGATGATGAAGAGTTTGTGAAGTTGCTGAAGAACTGCTACAAAGCTATTCCCAGTGATGGAAAAGTGATTGTTGTGGATTTGATTGTTCCTGTTTTGCCTAATAGTACTGTTATTGCGAGGACTGCTTTCCAAACTGACCTATTGATGATGGCTCAAACCGCACGAGGGAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTATCTTCTGGATTCAGTGGCATCAGATTCGTCTGCTTTGTCTCTGGCTTCTGGATTATGGAGTTTTTCAAGTAG 969 0.4458 MAPPNETDNGEAKQLQHVEEEQDGLLFALNMVSSVAFPLGVNTANELGIFDIMAKAGADAKLSAEEITEKVGIKNPQAPTMVDRILRLLASHSMLSSCLGEEGQNSCKRLYSLTYASKYFVSDADGVSFGASLNLILGKVFMDSWTELKGAIAEGGIAFNRIYGMNIFEYSAVDPTFNYGLNKVMFNTTTIVTNRVLELYDGFKNINRLVDVGGGWACVCGNFQWILHDWDDEEFVKLLKNCYKAIPSDGKVIVVDLIVPVLPNSTVIARTAFQTDLLMMAQTARGKERTQNEFMELALSSGFSGIRFVCFVSGFWIMEFFK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00468 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 320 IPR029063 -
Vian9g00468 322 FunFam Caffeic acid 3-O-methyltransferase 7 120 - -
Vian9g00468 322 Gene3D Vaccinia Virus protein VP39 224 311 IPR029063 -
Vian9g00468 322 Gene3D - 5 120 IPR036388 -
Vian9g00468 322 Gene3D Vaccinia Virus protein VP39 121 222 IPR029063 -
Vian9g00468 322 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 322 IPR016461 GO:0008168
Vian9g00468 322 Pfam O-methyltransferase domain 145 217 IPR001077 GO:0008171
Vian9g00468 322 Pfam O-methyltransferase domain 224 304 IPR001077 GO:0008171
Vian9g00468 322 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Vian9g00468 322 PANTHER O-METHYLTRANSFERASE 223 308 IPR016461 GO:0008168
Vian9g00468 322 Pfam Dimerisation domain 42 90 IPR012967 GO:0046983
Vian9g00468 322 PIRSF O-mtase 6 221 IPR016461 GO:0008168
Vian9g00468 322 PIRSF O-mtase 223 322 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00468 Vian-Chr9 4756940 4759679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00468 14 322 Monolignol Biosynthesis Gene Families AT5G54160 38.202 1.77e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00468 K13066 - var:108346436 453.751