Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00462 ATGATAACCATGGAACCTAGAGTGATAGGGGATTACATAATGGGCCCTCCAATCGGGTCGGGTTCCTTTGCCGTGGTATGGCGTTCAAGGCACCGAGTTTCCGGTTTGGAAGTTGCGATTAAGGAGATTGATCAGAGACAACTCAGTCCTAAAGTCCACGAACATCTTCTCAAAGAGATTTCGATCCTTAGCACCATCAAGCACCCCAACATAGTTCGACTCTTTGAGACAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCACCGCCATGGCAAAGTTTCTGAAACTATTGCACGCCATCTCATGAGGCAATTGGTTTATAATCTGGGTGTTCTTGTAGCTGCTGGGTTACAGGTGCTTCAGGAAAAGAACCTCATTCACAGAGATTTAAAACCACAGAATTTACTATTGGCAACTACTGCAGCCACAACAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGAGTTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATTATTGAGAATCAAAAGTACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATTTTGTATCAACTAGTGATTGGGAGGCCACCATTTGATGGAAATACTCAATATCAGCTTTTTCAAAATATTTTGGCATCCACTGAACTGTACTTTCCGCCCGAGGCATTGCAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTCTTACGTCAAAATCCAGATGAGAGATTAACATTCAAGGCTTTCTTCAACCACAATTTCCTTCAGAATTCCAGGTCAACCGTAGGAAAATTGACTGTTCATCAATCAGGTGGCTCTCTGTCCGAGATGTCTCCAACTATTGCAAGTGGTAAGATGGGGAAGGCTGTTGATGCTGATACTCATTTGTCATACCCTTCTGTAGAGAAAGACTATGTACTTGTCCATTCCCATTTTGCATCATTGGAGGCTTTTTCTGACTACTTTGATGCATCTGTGCAAGATGATTCCTTATACAGTATTGCTCAAAGTCATTCAAAGATTGCTAAACCGGATATTGGAGTTCCAAAACAAACAACGGATCTGACATCTTTCTCCAGTAGAGGATTAGAGAATCTAGAAAGCAATAAACTTGAGGCATGTGTGGCATCATGTGAATTTACTGCTTTAAGGGAAGAGCATGATATTTCCTCACTGCAACCTTCAAACAGGTTAAAGTTGTTGCATGAGTATGGGAAGATCCTTAAAGAACTTTCGCAACAAAAGTATGATACAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGATTCTGGCGATATGGAAGAAGGCTCTAGAAATCTGTAACTCTTGGATGGCCTCCCTTACTACTAGTGGGTTTCCTGAAAGCAGTTCAACTAACGAATCCATATCTTCAAGTAATGTGGAGTTACCACAGACTTCAGAACTGAAAATAAATTTTAGTGATCCTCCCTCTGTCTCCATGTGGGCCAAACATGAGTTTGTTCTTGCTGTTGATCGTGCTGAAAAACTATCATGTCGTGTTCAAAATATGGATGGAGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAACGCTCTTTCAATCGGGACAAGTGGTGCGGTAGATGAATATATGGAGAACAGAGATAGGGCTAGTGCTTCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCCACTAATAAAGAGAGAATCTTACAATACATTTACACATTACAGTCTCGTAAGAAATCTTCGTTGGAGTCCTCTTCAAATAAGCTACTTTCACTTACAACAAAGTAG 1911 0.415 MITMEPRVIGDYIMGPPIGSGSFAVVWRSRHRVSGLEVAIKEIDQRQLSPKVHEHLLKEISILSTIKHPNIVRLFETIQTNDRIYLVLEYCAGGDLAAYIHRHGKVSETIARHLMRQLVYNLGVLVAAGLQVLQEKNLIHRDLKPQNLLLATTAATTIMKIGDFGFARSLTPQSLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNTQYQLFQNILASTELYFPPEALQELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQNSRSTVGKLTVHQSGGSLSEMSPTIASGKMGKAVDADTHLSYPSVEKDYVLVHSHFASLEAFSDYFDASVQDDSLYSIAQSHSKIAKPDIGVPKQTTDLTSFSSRGLENLESNKLEACVASCEFTALREEHDISSLQPSNRLKLLHEYGKILKELSQQKYDTGLYLESLAVELVILAIWKKALEICNSWMASLTTSGFPESSSTNESISSSNVELPQTSELKINFSDPPSVSMWAKHEFVLAVDRAEKLSCRVQNMDGAAEMPDAMEIIFQNALSIGTSGAVDEYMENRDRASASYSRAMLLLSFLVREAENLPLNPPFSLIATNKERILQYIYTLQSRKKSSLESSSNKLLSLTTK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00462 636 Gene3D Transferase(Phosphotransferase) domain 1 4 340 - -
Vian9g00462 636 SUPERFAMILY Protein kinase-like (PK-like) 8 279 IPR011009 -
Vian9g00462 636 ProSiteProfiles Protein kinase domain profile. 12 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00462 636 FunFam Non-specific serine/threonine protein kinase 1 92 - -
Vian9g00462 636 CDD STKc_ATG1_ULK_like 18 277 - -
Vian9g00462 636 SMART serkin_6 12 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00462 636 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Vian9g00462 636 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 552 IPR045269 GO:0004674|GO:0006914
Vian9g00462 636 FunFam Maternal embryonic leucine zipper kinase 6 293 - -
Vian9g00462 636 Pfam Protein kinase domain 16 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00462 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00462 Vian-Chr9 4654540 4659063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00462 8 268 CBL-interacting serine-threonine protein kinases AT2G30360 34.831 3.20e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Vian9g00462 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00462 - K08269 gmx:100779262 897.886